RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 HACD2Q6Y1H2 254 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 MSANTD1Q6ZTZ1 278 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 ZDHHC21Q8IVQ6 265 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 OR4F6Q8NGB9 312 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 MCMBPQ9BTE3 642 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 RACGAP1Q9H0H5 632 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 SLC22A14Q9Y267 594 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 MAPK10P53779 464 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 CAMKK1Q8N5S9 505 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 SLC35G5Q96KT7 338 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 ZNF358Q9NW07 568 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 GDE1Q9NZC3 331 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 TGM5O43548 720 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 OR6B1O95007 311 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 CD247P20963 164 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 LPCAT4Q643R3 524 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 RBM44Q6ZP01 1051 aaKnown RBP11.25□□□□□ -0.61
PTCH1-208ENST00000430669 PIGXQ8TBF5 258 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 RDH12Q96NR8 316 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 DEPDC7Q96QD5 511 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 CPEB1Q9BZB8 566 aaKnown RBP11.25□□□□□ -0.61
PTCH1-208ENST00000430669 CWH43Q9H720 699 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 hCG_2014768A0A024R1R8 64 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 SAGE2PA6NJ88 616 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 CCDC85CA6NKD9 419 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 PSMD11O00231 422 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 TEX28O15482 410 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 H6PDO95479 791 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 SERPINA1P01009 418 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 DNAJA1P31689 397 aaKnown RBP11.25□□□□□ -0.61
PTCH1-208ENST00000430669 NRIP1P48552 1158 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 GSSP48637 474 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 COX10Q12887 443 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 C6orf52Q5T4I8 152 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 ENDOVQ8N8Q3 282 aaKnown RBP11.25□□□□□ -0.61
PTCH1-208ENST00000430669 ZNF527Q8NB42 609 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 GLYATL1Q969I3 302 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 OR52B2Q96RD2 323 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 TMEM27Q9HBJ8 222 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 NEK6Q9HC98 313 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 TMLHEQ9NVH6 421 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 DDX18Q9NVP1 670 aaKnown RBP11.25□□□□□ -0.61
PTCH1-208ENST00000430669 DGKBQ9Y6T7 804 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 EEDO75530 441 aaKnown RBP11.25□□□□□ -0.61
PTCH1-208ENST00000430669 SLC8B1Q6J4K2 584 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 TMPRSS11AQ6ZMR5 421 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 FGD2Q7Z6J4 655 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 FAM20CQ8IXL6 584 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 CGREF1Q99674 301 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 FAM83CQ9BQN1 747 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 RMI1Q9H9A7 625 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 MANBAO00462 879 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 NDUFB5O43674 189 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 NR2F6P10588 404 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 PTSQ03393 145 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 TMEM115Q12893 351 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-208ENST00000430669 TRIM32Q13049 653 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 NEK10Q6ZWH5 1172 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 GIPC3Q8TF64 312 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 EXOSC8Q96B26 276 aaKnown RBP11.25□□□□□ -0.61
PTCH1-208ENST00000430669 ERLEC1Q96DZ1 483 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 WNT6Q9Y6F9 365 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 UGDHO60701 494 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 ZNF24P17028 368 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 UGT1A6P19224 532 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 UGT1A1P22309 533 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 PEX2P28328 305 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 OLIG2Q13516 323 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 CBR4Q8N4T8 237 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 TRPV3Q8NET8 790 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 SLC35A5Q9BS91 424 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 BRF2Q9HAW0 419 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 TUBA8Q9NY65 449 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-208ENST00000430669 CCNB2O95067 398 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 CTSKP43235 329 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 CRISP3P54108 245 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 INAVAQ3KP66 663 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 ERN2Q76MJ5 926 aaKnown RBP11.25□□□□□ -0.61
PTCH1-208ENST00000430669 CHMP1BQ7LBR1 199 aa11.25□□□□□ -0.61
PTCH1-208ENST00000430669 RGS17Q9UGC6 210 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-208ENST00000430669 TDRD6O60522 2096 aaKnown RBP11.25□□□□□ -0.61
PTCH1-208ENST00000430669 GRIA2P42262 883 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 CSNK1DP48730 415 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 ROR2Q01974 943 aaKnown RBP11.24□□□□□ -0.61
PTCH1-208ENST00000430669 CST9Q5W186 159 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 RANBP10Q6VN20 620 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 HTR3DQ70Z44 454 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 LRRTM3Q86VH5 581 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 ZZZ3Q8IYH5 903 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 SETD7Q8WTS6 366 aaKnown RBP11.24□□□□□ -0.61
PTCH1-208ENST00000430669 IPCEF1Q8WWN9 437 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-208ENST00000430669 LYVE1Q9Y5Y7 322 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 RHPN2P1A8MT19 583 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 H7C0S8 307 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 OXTRP30559 389 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 CD68P34810 354 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-208ENST00000430669 MSX2P35548 267 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-208ENST00000430669 ZNF763Q0D2J5 394 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 AURKBQ96GD4 344 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-208ENST00000430669 ARNT2Q9HBZ2 717 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms