RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 FLRT1Q9NZU1 646 aa13.4□□□□□ -0.26
SGMS1-203ENST00000429490 KLHL3Q9UH77 587 aa13.4□□□□□ -0.26
SGMS1-203ENST00000429490 PCDHB8Q9UN66 801 aa13.4□□□□□ -0.26
SGMS1-203ENST00000429490 PCDHB1Q9Y5F3 818 aa13.4□□□□□ -0.26
SGMS1-203ENST00000429490 ARHGEF9O43307 516 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 TMCC2O75069 709 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 PTCHD3Q3KNS1 767 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 PLEKHG6Q3KR16 790 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 CYP2U1Q7Z449 544 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 CLECL1Q8IZS7 167 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 NTN4Q9HB63 628 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 ERVK13-1Q9NX77 482 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 TEKT2Q9UIF3 430 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 ITGB1BP2Q9UKP3 347 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 DLGAP4Q9Y2H0 992 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 RBBP6Q7Z6E9 1792 aaKnown RBP13.39□□□□□ -0.27
SGMS1-203ENST00000429490 TCRBV5S2A0A599 114 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 AQP9O43315 295 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 SNX4O95219 450 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 STSP08842 583 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 EPORP19235 508 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 CYP2A7P20853 494 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 GADD45AP24522 165 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 TACR1P25103 407 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 SOWAHCQ53LP3 525 aaPredicted RBP13.39□□□□□ -0.27
SGMS1-203ENST00000429490 CPTPQ5TA50 214 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 MFSD4BQ5TF39 518 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 DLEU7Q6UYE1 221 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 EIF3MQ7L2H7 374 aaKnown RBP13.39□□□□□ -0.27
SGMS1-203ENST00000429490 FAM217AQ8IXS0 508 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 BPIFB1Q8TDL5 484 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 TMEM203Q969S6 136 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 MYEOVQ96EZ4 313 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 SNTG1Q9NSN8 517 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 ZNF225Q9UK10 706 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 DHRS7Q9Y394 339 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 PCDHGA4Q9Y5G9 962 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 TPST2O60704 377 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 PDYNP01213 254 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 S100A1P23297 94 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 HNF4AP41235 474 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 GRIK2Q13002 908 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 DSC3Q14574 896 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 HKDC1Q2TB90 917 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 ZFP69Q49AA0 526 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 KIAA1614Q5VZ46 1190 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 CCBE1Q6UXH8 406 aaPredicted RBP13.39□□□□□ -0.27
SGMS1-203ENST00000429490 RRM2BQ7LG56 351 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 ADGRG2Q8IZP9 1017 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 ITPAQ9BY32 194 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 GPN2Q9H9Y4 310 aaPredicted RBP13.39□□□□□ -0.27
SGMS1-203ENST00000429490 SIAEQ9HAT2 523 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 POPDC3Q9HBV1 291 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 C11orf16Q9NQ32 467 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 MIEF1Q9NQG6 463 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 CTPS2Q9NRF8 586 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 INIPQ9NRY2 104 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 MALT1Q9UDY8 824 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 ZNF221Q9UK13 617 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 CDH7Q9ULB5 785 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 LY75O60449 1722 aa13.39□□□□□ -0.27
SGMS1-203ENST00000429490 A0A1B0GVM2 712 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 HAS3O00219 553 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 NPPAP01160 153 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 EPHA2P29317 976 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 GATMP50440 423 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 CDH4P55283 916 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 ABHD18Q0P651 414 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 CBLBQ13191 982 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 CAMK2GQ13555 558 aaPredicted RBP13.38□□□□□ -0.27
SGMS1-203ENST00000429490 NKG7Q16617 165 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 FAM180BQ6P0A1 224 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 CERS6Q6ZMG9 384 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 TMEM179BQ7Z7N9 219 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 PTRH1Q86Y79 214 aaKnown RBP13.38□□□□□ -0.27
SGMS1-203ENST00000429490 OR4K1Q8NGD4 311 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 BARD1Q99728 777 aaKnown RBP13.38□□□□□ -0.27
SGMS1-203ENST00000429490 CARS2Q9HA77 564 aaKnown RBP13.38□□□□□ -0.27
SGMS1-203ENST00000429490 SLC13A4Q9UKG4 626 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 POLR2AP24928 1970 aaKnown RBP13.38□□□□□ -0.27
SGMS1-203ENST00000429490 ARID1BQ8NFD5 2236 aaPredicted RBP13.38□□□□□ -0.27
SGMS1-203ENST00000429490 RPLP0P05388 317 aaKnown RBP13.38□□□□□ -0.27
SGMS1-203ENST00000429490 ANXA4P09525 319 aaPredicted RBP13.38□□□□□ -0.27
SGMS1-203ENST00000429490 PABPC1P11940 636 aaKnown RBP13.38□□□□□ -0.27
SGMS1-203ENST00000429490 FPR1P21462 350 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 CDC42P60953 191 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 KRR1Q13601 381 aaKnown RBP13.38□□□□□ -0.27
SGMS1-203ENST00000429490 SPATC1Q76KD6 591 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 CEP68Q76N32 757 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 BHLHA9Q7RTU4 235 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 ZNF467Q7Z7K2 595 aaPredicted RBP13.38□□□□□ -0.27
SGMS1-203ENST00000429490 PHYKPLQ8IUZ5 450 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 ZNF548Q8NEK5 533 aaPredicted RBP13.38□□□□□ -0.27
SGMS1-203ENST00000429490 OR4A15Q8NGL6 344 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 VANGL1Q8TAA9 524 aaPredicted RBP13.38□□□□□ -0.27
SGMS1-203ENST00000429490 DUS3LQ96G46 650 aaKnown RBP13.38□□□□□ -0.27
SGMS1-203ENST00000429490 FOPNLQ96NB1 174 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 CD244Q9BZW8 370 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 FZD4Q9ULV1 537 aa13.38□□□□□ -0.27
SGMS1-203ENST00000429490 CCNDBP1O95273 360 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms