RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 IL1RAPQ9NPH3 570 aa10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 UTS2RQ9UKP6 389 aa10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 PCDHB8Q9UN66 801 aa10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 NAALAD2Q9Y3Q0 740 aa10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 FAM172BPA6NC97 362 aa10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 FAM25AB3EWG3 89 aa10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 FAM25CB3EWG5 89 aa10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 FAM25GB3EWG6 89 aa10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 GRK4P32298 578 aa10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 NRIP1P48552 1158 aa10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 MED22Q15528 200 aa10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 C18orf21Q32NC0 220 aaPredicted RBP10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 STEAP3Q658P3 488 aa10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 PRR23CQ6ZRP0 262 aa10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 COL21A1Q96P44 957 aa10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 CD244Q9BZW8 370 aa10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 TP63Q9H3D4 680 aaPredicted RBP10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 CARS2Q9HA77 564 aaKnown RBP10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 SPASTQ9UBP0 616 aa10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 ZNF646O15015 1829 aaPredicted RBP10.5□□□□□ -0.73
ATP2C1-204ENST00000428331 GJB3O75712 270 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 IL1RNP18510 177 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 KDELR2P33947 212 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 CLDN8P56748 225 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 TIAL1Q01085 375 aaKnown RBP eCLIP10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 IFITM3Q01628 133 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 FPGSQ05932 587 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 TMEM179BQ7Z7N9 219 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 ITM2CQ9NQX7 267 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 UGT2A1Q9Y4X1 527 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 SCAMP3O14828 347 aaKnown RBP10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 RPLP2P05387 115 aaKnown RBP10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 GADD45AP24522 165 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 ARPC4P59998 168 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 CDC42P60953 191 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 ABRQ12979 859 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 DDX39BQ13838 428 aaKnown RBP10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 ARMC12Q5T9G4 340 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 PDE12Q6L8Q7 609 aaKnown RBP10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 FAM151BQ6UXP7 276 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 SNX20Q7Z614 316 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 CLMPQ9H6B4 373 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 ZBTB20Q9HC78 741 aaPredicted RBP10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 TRPS1Q9UHF7 1281 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 LYVE1Q9Y5Y7 322 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 A3GALT2U3KPV4 340 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 TNFRSF11BO00300 401 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 MUSKO15146 869 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 CLDN11O75508 207 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 CD52P31358 61 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 ZFP36L2P47974 494 aaKnown RBP10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 VMACQ2NL98 169 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 CAPN13Q6MZZ7 669 aaPredicted RBP10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 SERPINA9Q86WD7 417 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 ATAD1Q8NBU5 361 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 HSH2DQ96JZ2 352 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 C8orf48Q96LL4 319 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 SLIRPQ9GZT3 109 aaKnown RBP10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 TMEFF2Q9UIK5 374 aaPredicted RBP10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 PARP14Q460N5 1801 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 FER1L6Q2WGJ9 1857 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 A0A0D9SEW6 157 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 MAGEB17A8MXT2 336 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 ADAMDEC1O15204 470 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 ENGP17813 658 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 POLR2EP19388 210 aaKnown RBP10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 PPIBP23284 216 aaKnown RBP10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 UGT2B10P36537 528 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 INPP1P49441 399 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 PRIM2P49643 509 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 DAPP51397 102 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 SRSF11Q05519 484 aaKnown RBP10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 OR4F3Q6IEY1 312 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 ZBTB2Q8N680 514 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 C9orf43Q8TAL5 461 aaPredicted RBP10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 CSGALNACT1Q8TDX6 532 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 CRELD1Q96HD1 420 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 MGME1Q9BQP7 344 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 ABCG8Q9H221 673 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 ACTL8Q9H568 366 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 IKZF5Q9H5V7 419 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 NMRK2Q9NPI5 230 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 CCDC177Q9NQR7 707 aaPredicted RBP10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 ASB1Q9Y576 335 aa10.49□□□□□ -0.73
ATP2C1-204ENST00000428331 CENPBD1B2RD01 187 aa10.48□□□□□ -0.73
ATP2C1-204ENST00000428331 OR7A17O14581 309 aa10.48□□□□□ -0.73
ATP2C1-204ENST00000428331 HAT1O14929 419 aa10.48□□□□□ -0.73
ATP2C1-204ENST00000428331 CD9P21926 228 aa10.48□□□□□ -0.73
ATP2C1-204ENST00000428331 CLK3P49761 638 aaKnown RBP10.48□□□□□ -0.73
ATP2C1-204ENST00000428331 CDH4P55283 916 aa10.48□□□□□ -0.73
ATP2C1-204ENST00000428331 ACSM2AQ08AH3 577 aa10.48□□□□□ -0.73
ATP2C1-204ENST00000428331 CATSPEREQ5SY80 951 aa10.48□□□□□ -0.73
ATP2C1-204ENST00000428331 ACSM2BQ68CK6 577 aa10.48□□□□□ -0.73
ATP2C1-204ENST00000428331 DEFB132Q7Z7B7 95 aa10.48□□□□□ -0.73
ATP2C1-204ENST00000428331 ZNF675Q8TD23 568 aa10.48□□□□□ -0.73
ATP2C1-204ENST00000428331 RHBDF1Q96CC6 855 aa10.48□□□□□ -0.73
ATP2C1-204ENST00000428331 PDLIM5Q96HC4 596 aaKnown RBP10.48□□□□□ -0.73
ATP2C1-204ENST00000428331 B3GALT6Q96L58 329 aa10.48□□□□□ -0.73
ATP2C1-204ENST00000428331 KCNC2Q96PR1 638 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms