RNA–Protein interactions for RNA: ENST00000425992.2

VDAC1-204, Transcript of voltage dependent anion channel 1, humanhuman

TSL 3

Gene VDAC1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-204ENST00000425992 SRPK3Q9UPE1 567 aa22.8■■□□□ 1.24
VDAC1-204ENST00000425992 CHMP2BQ9UQN3 213 aa22.8■■□□□ 1.24
VDAC1-204ENST00000425992 HEMK1Q9Y5R4 338 aaPredicted RBP22.8■■□□□ 1.24
VDAC1-204ENST00000425992 TNRC6AQ8NDV7 1962 aaKnown RBP22.8■■□□□ 1.24
VDAC1-204ENST00000425992 MDC1Q14676 2089 aaKnown RBP22.79■■□□□ 1.24
VDAC1-204ENST00000425992 ANKRD12Q6UB98 2062 aa22.79■■□□□ 1.24
VDAC1-204ENST00000425992 TP73O15350 636 aa22.79■■□□□ 1.24
VDAC1-204ENST00000425992 SLC28A2O43868 658 aa22.79■■□□□ 1.24
VDAC1-204ENST00000425992 NRP2O60462 931 aa22.79■■□□□ 1.24
VDAC1-204ENST00000425992 SEC31AO94979 1220 aaKnown RBP22.79■■□□□ 1.24
VDAC1-204ENST00000425992 ATXN8OSP0DMR3 200 aa22.79■■□□□ 1.24
VDAC1-204ENST00000425992 GCGRP47871 477 aa22.79■■□□□ 1.24
VDAC1-204ENST00000425992 PMS2P54278 862 aa22.79■■□□□ 1.24
VDAC1-204ENST00000425992 YBX1P67809 324 aaKnown RBP22.79■■□□□ 1.24
VDAC1-204ENST00000425992 TIAL1Q01085 375 aaKnown RBP eCLIP22.79■■□□□ 1.24
VDAC1-204ENST00000425992 SUSD1Q6UWL2 747 aa22.79■■□□□ 1.24
VDAC1-204ENST00000425992 PTRH1Q86Y79 214 aaKnown RBP22.79■■□□□ 1.24
VDAC1-204ENST00000425992 CNTN4Q8IWV2 1026 aa22.79■■□□□ 1.24
VDAC1-204ENST00000425992 CPNE9Q8IYJ1 553 aa22.79■■□□□ 1.24
VDAC1-204ENST00000425992 ADAMTS17Q8TE56 1095 aa22.79■■□□□ 1.24
VDAC1-204ENST00000425992 ASB11Q8WXH4 323 aa22.79■■□□□ 1.24
VDAC1-204ENST00000425992 ZUFSPQ96AP4 578 aa22.79■■□□□ 1.24
VDAC1-204ENST00000425992 CERS2Q96G23 380 aa22.79■■□□□ 1.24
VDAC1-204ENST00000425992 SNF8Q96H20 258 aa22.79■■□□□ 1.24
VDAC1-204ENST00000425992 ZNF71Q9NQZ8 489 aaPredicted RBP22.79■■□□□ 1.24
VDAC1-204ENST00000425992 TARM1B6A8C7 271 aa22.78■■□□□ 1.24
VDAC1-204ENST00000425992 C9J4A7 227 aa22.78■■□□□ 1.24
VDAC1-204ENST00000425992 SMAPO00193 183 aa22.78■■□□□ 1.24
VDAC1-204ENST00000425992 CTSVO60911 334 aa22.78■■□□□ 1.24
VDAC1-204ENST00000425992 VPS26AO75436 327 aa22.78■■□□□ 1.24
VDAC1-204ENST00000425992 ENO3P13929 434 aaPredicted RBP22.78■■□□□ 1.24
VDAC1-204ENST00000425992 CARSP49589 748 aaKnown RBP22.78■■□□□ 1.24
VDAC1-204ENST00000425992 HIF1AQ16665 826 aa22.78■■□□□ 1.24
VDAC1-204ENST00000425992 ZC3H12BQ5HYM0 836 aaKnown RBP22.78■■□□□ 1.24
VDAC1-204ENST00000425992 RBM20Q5T481 1227 aaKnown RBP22.78■■□□□ 1.24
VDAC1-204ENST00000425992 TENM4Q6N022 2769 aa22.78■■□□□ 1.24
VDAC1-204ENST00000425992 APLFQ8IW19 511 aaPredicted RBP22.78■■□□□ 1.24
VDAC1-204ENST00000425992 PROKR1Q8TCW9 393 aa22.78■■□□□ 1.24
VDAC1-204ENST00000425992 THAP4Q8WY91 577 aa22.78■■□□□ 1.24
VDAC1-204ENST00000425992 NDC1Q9BTX1 674 aa22.78■■□□□ 1.24
VDAC1-204ENST00000425992 ACAT2Q9BWD1 397 aa22.78■■□□□ 1.24
VDAC1-204ENST00000425992 TRIM55Q9BYV6 548 aa22.78■■□□□ 1.24
VDAC1-204ENST00000425992 TXLNGQ9NUQ3 528 aa22.78■■□□□ 1.24
VDAC1-204ENST00000425992 ZC3H7BQ9UGR2 993 aaKnown RBP22.78■■□□□ 1.24
VDAC1-204ENST00000425992 KLK4Q9Y5K2 254 aa22.78■■□□□ 1.24
VDAC1-204ENST00000425992 TEX264Q9Y6I9 313 aa22.78■■□□□ 1.24
VDAC1-204ENST00000425992 GFYI3L273 518 aa22.77■■□□□ 1.24
VDAC1-204ENST00000425992 RFPL1O75677 317 aa22.77■■□□□ 1.24
VDAC1-204ENST00000425992 DNAJB5O75953 348 aa22.77■■□□□ 1.24
VDAC1-204ENST00000425992 AHSGP02765 367 aa22.77■■□□□ 1.24
VDAC1-204ENST00000425992 MCM3P25205 808 aa22.77■■□□□ 1.24
VDAC1-204ENST00000425992 RPL21P46778 160 aaKnown RBP22.77■■□□□ 1.24
VDAC1-204ENST00000425992 PNLIPRP1P54315 467 aa22.77■■□□□ 1.24
VDAC1-204ENST00000425992 ARL4CP56559 192 aa22.77■■□□□ 1.24
VDAC1-204ENST00000425992 MRPS25P82663 173 aaKnown RBP22.77■■□□□ 1.24
VDAC1-204ENST00000425992 ARHGAP19Q14CB8 494 aa22.77■■□□□ 1.24
VDAC1-204ENST00000425992 MLIPQ5VWP3 458 aa22.77■■□□□ 1.24
VDAC1-204ENST00000425992 CPZQ66K79 652 aa22.77■■□□□ 1.24
VDAC1-204ENST00000425992 TRMT10BQ6PF06 316 aaKnown RBP22.77■■□□□ 1.24
VDAC1-204ENST00000425992 PIWIL4Q7Z3Z4 852 aaKnown RBP22.77■■□□□ 1.24
VDAC1-204ENST00000425992 FBXO15Q8NCQ5 510 aaPredicted RBP22.77■■□□□ 1.24
VDAC1-204ENST00000425992 GABPB2Q8TAK5 448 aaPredicted RBP22.77■■□□□ 1.24
VDAC1-204ENST00000425992 SMPDL3AQ92484 453 aa22.77■■□□□ 1.24
VDAC1-204ENST00000425992 SLC6A20Q9NP91 592 aa22.77■■□□□ 1.24
VDAC1-204ENST00000425992 TRMT6Q9UJA5 497 aaKnown RBP22.77■■□□□ 1.24
VDAC1-204ENST00000425992 TLK1Q9UKI8 766 aa22.77■■□□□ 1.24
VDAC1-204ENST00000425992 SPTA1P02549 2419 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 EFCAB8A8MWE9 144 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 PYCARD-AS1I3L0S3 204 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 J3QKU1 62 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 K7EM74 188 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 SUV39H1O43463 412 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 SLC16A8O95907 504 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 SYF2O95926 243 aaKnown RBP22.76■■□□□ 1.23
VDAC1-204ENST00000425992 NR1D1P20393 614 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 CMPK1P30085 196 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 CDKN2DP55273 166 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 DCDP81605 110 aaKnown RBP22.76■■□□□ 1.23
VDAC1-204ENST00000425992 CHAF1BQ13112 559 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 TSTA3Q13630 321 aaPredicted RBP22.76■■□□□ 1.23
VDAC1-204ENST00000425992 SLC9A5Q14940 896 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 TEDDM1Q5T9Z0 273 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 STEAP4Q687X5 459 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 KIAA0408Q6ZU52 694 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 ANKMY2Q8IV38 441 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 PPFIBP2Q8ND30 876 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 ZNF480Q8WV37 535 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 DLG3Q92796 817 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 LRRC39Q96DD0 335 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 ZNF285Q96NJ3 590 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 SELENOSQ9BQE4 189 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 DHRS4Q9BTZ2 278 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 PPANQ9NQ55 473 aaKnown RBP22.76■■□□□ 1.23
VDAC1-204ENST00000425992 TP53TG5Q9Y2B4 290 aa22.76■■□□□ 1.23
VDAC1-204ENST00000425992 NUP210LQ5VU65 1888 aa22.75■■□□□ 1.23
VDAC1-204ENST00000425992 ARGFXA6NJG6 315 aa22.75■■□□□ 1.23
VDAC1-204ENST00000425992 MKRN2OSH3BPM6 223 aa22.75■■□□□ 1.23
VDAC1-204ENST00000425992 KLF7O75840 302 aaPredicted RBP22.75■■□□□ 1.23
VDAC1-204ENST00000425992 ITGAXP20702 1163 aa22.75■■□□□ 1.23
VDAC1-204ENST00000425992 RPA3P35244 121 aaPredicted RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms