RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 RNF175Q8N4F7 328 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 NEIL2Q969S2 332 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 CMTM7Q96FZ5 175 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 UHRF1Q96T88 793 aaPredicted RBP25.68■■□□□ 1.7
LDB1-202ENST00000425280 GAS2L1Q99501 681 aaPredicted RBP25.68■■□□□ 1.7
LDB1-202ENST00000425280 PHF7Q9BWX1 381 aaPredicted RBP25.68■■□□□ 1.7
LDB1-202ENST00000425280 SUCOQ9UBS9 1254 aaKnown RBP25.68■■□□□ 1.7
LDB1-202ENST00000425280 ANGPTL2Q9UKU9 493 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 DYTNA2CJ06 578 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 SLC31A1O15431 190 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 BCAS2O75934 225 aaPredicted RBP25.67■■□□□ 1.7
LDB1-202ENST00000425280 CEACAM5P06731 702 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 NPPBP16860 134 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 CASP2P42575 452 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 PNLIPRP1P54315 467 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 NFYCQ13952 458 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 FBXO43Q4G163 708 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 USP39Q53GS9 565 aaKnown RBP25.67■■□□□ 1.7
LDB1-202ENST00000425280 SAMD4BQ5PRF9 694 aaKnown RBP25.67■■□□□ 1.7
LDB1-202ENST00000425280 SLCO4C1Q6ZQN7 724 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 NRG4Q8WWG1 115 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 FAM3CQ92520 227 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 MYOCQ99972 504 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 APOOQ9BUR5 198 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 ABCD2Q9UBJ2 740 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 SLC17A4Q9Y2C5 497 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 KLHL33A6NCF5 533 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 H0YIV9 168 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 BCKDHAP12694 445 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 CD72P21854 359 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 VARSP26640 1264 aaKnown RBP25.67■■□□□ 1.7
LDB1-202ENST00000425280 ZNF33BQ06732 778 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 FOXM1Q08050 763 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 E2F2Q14209 437 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 CCDC85BQ15834 202 aaPredicted RBP25.67■■□□□ 1.7
LDB1-202ENST00000425280 CHST15Q7LFX5 561 aaPredicted RBP25.67■■□□□ 1.7
LDB1-202ENST00000425280 DCUN1D3Q8IWE4 304 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 RAD51AP1Q96B01 352 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 ASB9Q96DX5 294 aa25.67■■□□□ 1.7
LDB1-202ENST00000425280 YBX1P67809 324 aaKnown RBP25.66■■□□□ 1.7
LDB1-202ENST00000425280 TSTA3Q13630 321 aaPredicted RBP25.66■■□□□ 1.7
LDB1-202ENST00000425280 ASB12Q8WXK4 309 aa25.66■■□□□ 1.7
LDB1-202ENST00000425280 APIPQ96GX9 242 aa25.66■■□□□ 1.7
LDB1-202ENST00000425280 MMP17Q9ULZ9 603 aa25.66■■□□□ 1.7
LDB1-202ENST00000425280 PLAGL1Q9UM63 463 aa25.66■■□□□ 1.7
LDB1-202ENST00000425280 SH2B3Q9UQQ2 575 aa25.66■■□□□ 1.7
LDB1-202ENST00000425280 DLGAP4Q9Y2H0 992 aa25.66■■□□□ 1.7
LDB1-202ENST00000425280 NME4O00746 187 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 ACP5P13686 325 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 KELP23276 732 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 SLC6A2P23975 617 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 DMPKQ09013 629 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 CSTF3Q12996 717 aaKnown RBP25.65■■□□□ 1.7
LDB1-202ENST00000425280 TRIM25Q14258 630 aaKnown RBP25.65■■□□□ 1.7
LDB1-202ENST00000425280 WLSQ5T9L3 541 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 SLC15A3Q8IY34 581 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 IL17FQ96PD4 163 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 DPY30Q9C005 99 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 BCAP29Q9UHQ4 241 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 CFAP20Q9Y6A4 193 aaKnown RBP25.65■■□□□ 1.7
LDB1-202ENST00000425280 IFRD1O00458 451 aaPredicted RBP25.65■■□□□ 1.7
LDB1-202ENST00000425280 RPL10P27635 214 aaKnown RBP25.65■■□□□ 1.7
LDB1-202ENST00000425280 DGKQP52824 942 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 ATXN3P54252 364 aaPredicted RBP25.65■■□□□ 1.7
LDB1-202ENST00000425280 SLC2A7Q6PXP3 512 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 LRRC74BQ6ZQY2 392 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 TMPRSS11BQ86T26 416 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 GALNT13Q8IUC8 556 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 BHLHE22Q8NFJ8 381 aaPredicted RBP25.65■■□□□ 1.7
LDB1-202ENST00000425280 ZBTB18Q99592 522 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 RMI1Q9H9A7 625 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 SGK2Q9HBY8 427 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 CMTM6Q9NX76 183 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 SLAMF8Q9P0V8 285 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 ACSL5Q9ULC5 683 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 C15orf41Q9Y2V0 281 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 DYRK1BQ9Y463 629 aa25.65■■□□□ 1.7
LDB1-202ENST00000425280 TCRBV21S2A2A0A5A6 115 aa25.64■■□□□ 1.7
LDB1-202ENST00000425280 BAG2O95816 211 aa25.64■■□□□ 1.7
LDB1-202ENST00000425280 CLCNKAP51800 687 aa25.64■■□□□ 1.7
LDB1-202ENST00000425280 DPP10Q8N608 796 aa25.64■■□□□ 1.7
LDB1-202ENST00000425280 OR5K2Q8NHB8 316 aa25.64■■□□□ 1.7
LDB1-202ENST00000425280 MTERF1Q99551 399 aaKnown RBP25.64■■□□□ 1.7
LDB1-202ENST00000425280 TIMM29Q9BSF4 260 aa25.64■■□□□ 1.7
LDB1-202ENST00000425280 PCDHAC1Q9H158 963 aa25.64■■□□□ 1.7
LDB1-202ENST00000425280 CCDC177Q9NQR7 707 aaPredicted RBP25.64■■□□□ 1.7
LDB1-202ENST00000425280 GMPR2Q9P2T1 348 aaKnown RBP25.64■■□□□ 1.7
LDB1-202ENST00000425280 TDRKHQ9Y2W6 561 aaKnown RBP25.64■■□□□ 1.7
LDB1-202ENST00000425280 KANSL1LA0AUZ9 987 aa25.64■■□□□ 1.69
LDB1-202ENST00000425280 SLC35G4P0C7Q5 338 aa25.64■■□□□ 1.69
LDB1-202ENST00000425280 AMD1P17707 334 aa25.64■■□□□ 1.69
LDB1-202ENST00000425280 ACSL1P33121 698 aa25.64■■□□□ 1.69
LDB1-202ENST00000425280 SFSWAPQ12872 951 aaKnown RBP25.64■■□□□ 1.69
LDB1-202ENST00000425280 CATSPEREQ5SY80 951 aa25.64■■□□□ 1.69
LDB1-202ENST00000425280 KRTCAP2Q8N6L1 136 aa25.64■■□□□ 1.69
LDB1-202ENST00000425280 CLHC1Q8NHS4 586 aa25.64■■□□□ 1.69
LDB1-202ENST00000425280 BTBD1Q9H0C5 482 aa25.64■■□□□ 1.69
LDB1-202ENST00000425280 SPATA6Q9NWH7 488 aaPredicted RBP25.64■■□□□ 1.69
LDB1-202ENST00000425280 TMED5Q9Y3A6 229 aa25.64■■□□□ 1.69
LDB1-202ENST00000425280 PCDHGA11Q9Y5H2 935 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms