RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 BPIFCQ8NFQ6 507 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 OR52L2PQ8NGH6 319 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 TRPC4APQ8TEL6 797 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 NTN5Q8WTR8 489 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 FCGR1BQ92637 280 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 PABPC5Q96DU9 382 aaKnown RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 RRNAD1Q96FB5 475 aaKnown RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 OXNAD1Q96HP4 312 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 C12orf66Q96MD2 445 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 LRFN5Q96NI6 719 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 MS4A10Q96PG2 267 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 FCRL4Q96PJ5 515 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 BTBD9Q96Q07 612 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 BBS4Q96RK4 519 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 SMC6Q96SB8 1091 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 SEPHS2Q99611 448 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 CHP1Q99653 195 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 COQ7Q99807 217 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 ALG12Q9BV10 488 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 TRIM62Q9BVG3 475 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 NUP58Q9BVL2 599 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 SCNM1Q9BWG6 230 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 GTPBP2Q9BX10 602 aaKnown RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 ALOXE3Q9BYJ1 711 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 R3HDMLQ9H3Y0 253 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 PLEKHA4Q9H4M7 779 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 EVA1AQ9H8M9 152 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 ROPN1Q9HAT0 212 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 UPF2Q9HAU5 1272 aaKnown RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 MAGEF1Q9HAY2 307 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 WDR6Q9NNW5 1121 aaKnown RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 KCNMB3Q9NPA1 279 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 IL26Q9NPH9 171 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 EQTNQ9NQ60 294 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 VSX1Q9NZR4 365 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 LARSQ9P2J5 1176 aaKnown RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 DBF4Q9UBU7 674 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 TESQ9UGI8 421 aaKnown RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 GPR132Q9UNW8 380 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 DHDHQ9UQ10 334 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 CHMP2BQ9UQN3 213 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 PADI2Q9Y2J8 665 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 FAM96BQ9Y3D0 163 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 INSL6Q9Y581 213 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 NOX1Q9Y5S8 564 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 A0A1B0GTW7 788 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 A0A1B0GUL7 405 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-205ENST00000424674 A0A1W2PPM1 405 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 MBLAC1A4D2B0 266 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-205ENST00000424674 OR6C68A6NDL8 312 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 A8MUI8 341 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 MEI4A8MW99 385 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 TARM1B6A8C7 271 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 NPIPB11E5RHQ5 1161 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 TRIM77I1YAP6 450 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 TRDMT1O14717 391 aaKnown RBP3.58□□□□□ -1.84
SF3B1-205ENST00000424674 POLR1CO15160 346 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-205ENST00000424674 ZNF264O43296 627 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 SEC14L5O43304 696 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 SULT1B1O43704 296 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 KCNJ13O60928 360 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 ATP6V1G1O75348 118 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 RSL1D1O76021 490 aaKnown RBP3.58□□□□□ -1.84
SF3B1-205ENST00000424674 KLHL2O95198 593 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 LUC7L3O95232 432 aaKnown RBP3.58□□□□□ -1.84
SF3B1-205ENST00000424674 ESRRBO95718 433 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 CAVIN2O95810 425 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 MT-CYBP00156 380 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-205ENST00000424674 C9P02748 559 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 MMP10P09238 476 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 PLA2G4BP0C869 781 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 OR8G3PP0DMU2 310 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 POU2F1P14859 743 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 HOXB9P17482 250 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-205ENST00000424674 CD72P21854 359 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 HTR2AP28223 471 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 CDC25AP30304 524 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 CDKN1AP38936 164 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 SLC1A3P43003 542 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 HAAOP46952 286 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 ALDH7A1P49419 539 aaKnown RBP3.58□□□□□ -1.84
SF3B1-205ENST00000424674 CNN1P51911 297 aaKnown RBP3.58□□□□□ -1.84
SF3B1-205ENST00000424674 SSTP61278 116 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 TUBA1BP68363 451 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 FOLH1Q04609 750 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 CSTF1Q05048 431 aaKnown RBP3.58□□□□□ -1.84
SF3B1-205ENST00000424674 TGM3Q08188 693 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 ZNF844Q08AG5 666 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 ASPHQ12797 758 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 PPIL2Q13356 520 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 MTHFSDQ2M296 383 aaKnown RBP3.58□□□□□ -1.84
SF3B1-205ENST00000424674 SOWAHAQ2M3V2 549 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 LDLRAP1Q5SW96 308 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 B3GNTL1Q67FW5 361 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-205ENST00000424674 NCR3LG1Q68D85 454 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 C18orf63Q68DL7 685 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 DEGS2Q6QHC5 323 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 FAM198BQ6UWH4 519 aa3.58□□□□□ -1.84
SF3B1-205ENST00000424674 MICALCLQ6ZW33 695 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms