RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 MAGEA2P43356 314 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 TM4SF4P48230 202 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 ATP4BP51164 291 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 GBX2P52951 348 aaPredicted RBP13.51□□□□□ -0.25
SREBF2-202ENST00000424354 NCCRP1Q6ZVX7 275 aaPredicted RBP13.51□□□□□ -0.25
SREBF2-202ENST00000424354 CEP68Q76N32 757 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 SLC28A3Q9HAS3 691 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 FLRT1Q9NZU1 646 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 MARK1Q9P0L2 795 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 MAU2Q9Y6X3 613 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 KDM4BO94953 1096 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 ZNF806P0C7X5 589 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 NT5EP21589 574 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 DEFA5Q01523 94 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 RFTN1Q14699 578 aaPredicted RBP13.51□□□□□ -0.25
SREBF2-202ENST00000424354 MBLAC2Q68D91 279 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 ISOC1Q96CN7 298 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 ZDHHC2Q9UIJ5 367 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 IQCF5A8MTL0 148 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 STOMP27105 288 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 CMPK1P30085 196 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 FLT3LGP49771 235 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 TSPAN5P62079 268 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 TXNL4AP83876 142 aaKnown RBP13.51□□□□□ -0.25
SREBF2-202ENST00000424354 ZSWIM3Q96MP5 696 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 FRMD6Q96NE9 622 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 KCNC2Q96PR1 638 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 IFT27Q9BW83 186 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 DPEP3Q9H4B8 488 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 SEC14L4Q9UDX3 406 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 I3L521 148 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 DCLK1O15075 740 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 ITGA10O75578 1167 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 ZNF45Q02386 682 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 C6orf183Q5T699 404 aa13.51□□□□□ -0.25
SREBF2-202ENST00000424354 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.51□□□□□ -0.25
SREBF2-202ENST00000424354 INO80EQ8NBZ0 244 aaPredicted RBP13.51□□□□□ -0.25
SREBF2-202ENST00000424354 ILVBLA1L0T0 632 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 VNN1O95497 513 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 PENKP01210 267 aaPredicted RBP13.5□□□□□ -0.25
SREBF2-202ENST00000424354 PPM1AP35813 382 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 RPL19P84098 196 aaKnown RBP13.5□□□□□ -0.25
SREBF2-202ENST00000424354 HSDL1Q3SXM5 330 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 RBM23Q86U06 439 aaKnown RBP13.5□□□□□ -0.25
SREBF2-202ENST00000424354 HAPLN3Q96S86 360 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 RNF6Q9Y252 685 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 CLIC1O00299 241 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 FFAR2O15552 330 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 HTRA2O43464 458 aaPredicted RBP13.5□□□□□ -0.25
SREBF2-202ENST00000424354 DLX3O60479 287 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 PRH1P02810 166 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 ALPPP05187 535 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 IDSP22304 550 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 ERP29P30040 261 aaKnown RBP13.5□□□□□ -0.25
SREBF2-202ENST00000424354 ECHS1P30084 290 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 NFKB2Q00653 900 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 CRB2Q5IJ48 1285 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 MMP27Q9H306 513 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 UCKL1Q9NWZ5 548 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 A0A1W2PP18 115 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 GNB5O14775 395 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 PRKCHP24723 683 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 HCAR3P49019 387 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 TSTQ16762 297 aaKnown RBP13.5□□□□□ -0.25
SREBF2-202ENST00000424354 NDUFA9Q16795 377 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 SLC35G1Q2M3R5 365 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 ADGRG6Q86SQ4 1221 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 PARGQ86W56 976 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 MARCH9Q86YJ5 346 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 PHTF2Q8N3S3 785 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 KAT2AQ92830 837 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 PSMG2Q969U7 264 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 OR51V1Q9H2C8 321 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 RPF2Q9H7B2 306 aaKnown RBP13.5□□□□□ -0.25
SREBF2-202ENST00000424354 TMLHEQ9NVH6 421 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 CFAP97Q9P2B7 532 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 PCDHGC4Q9Y5F7 938 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 COLEC10Q9Y6Z7 277 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 A0A1W2PPW3 197 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 H0YAE9 185 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 DUSP4Q13115 394 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 NCBP2-AS2Q69YL0 99 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 EIF5AL1Q6IS14 154 aaKnown RBP13.5□□□□□ -0.25
SREBF2-202ENST00000424354 SLC37A3Q8NCC5 494 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 ING5Q8WYH8 240 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 NCSTNQ92542 709 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 HDAC2Q92769 488 aaKnown RBP13.5□□□□□ -0.25
SREBF2-202ENST00000424354 PCED1BQ96HM7 432 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 PYURFQ96I23 114 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 SLC29A3Q9BZD2 475 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 POLR3BQ9NW08 1133 aaPredicted RBP13.5□□□□□ -0.25
SREBF2-202ENST00000424354 SPATA7Q9P0W8 599 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 RIMKLBQ9ULI2 386 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 ZFP37Q9Y6Q3 630 aaPredicted RBP13.5□□□□□ -0.25
SREBF2-202ENST00000424354 CHD4Q14839 1912 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 NEMP2A6NFY4 417 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 C7P10643 843 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 TFPIP10646 304 aa13.5□□□□□ -0.25
SREBF2-202ENST00000424354 STXBP1P61764 594 aaKnown RBP13.5□□□□□ -0.25
SREBF2-202ENST00000424354 DUSP28Q4G0W2 176 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms