RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 SCHIP1Q9P0W5 487 aaPredicted RBP3.46□□□□□ -1.86
TOP2A-201ENST00000423485 PPP4R1LQ9P1A2 415 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 HSFX1Q9UBD0 423 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF282Q9UDV7 671 aaPredicted RBP3.46□□□□□ -1.86
TOP2A-201ENST00000423485 RCOR1Q9UKL0 485 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF214Q9UL59 606 aaPredicted RBP3.46□□□□□ -1.86
TOP2A-201ENST00000423485 WDR90Q96KV7 1748 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 CTAGE15A4D2H0 777 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 FAM25EA8MYX2 175 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 SLC27A2O14975 620 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF623O75123 536 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 STK17BO94768 372 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 PGLSO95336 258 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 PRAMEF12O95522 483 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 CYP11A1P05108 521 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 CTAGE8P0CG41 777 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 APEHP13798 732 aaKnown RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 POU2F1P14859 743 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 DDCP20711 480 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 NT5EP21589 574 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 CDK7P50613 346 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 SSR4P51571 173 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 SLC5A3P53794 718 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 DNAJC3Q13217 504 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 MPP3Q13368 585 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 PTPRNQ16849 979 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 UGP2Q16851 508 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 Q4G0T1 1027 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 MARCH8Q5T0T0 291 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 TMEM53Q6P2H8 277 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 CENPUQ71F23 418 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 SYVN1Q86TM6 617 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 CTAGE6Q86UF2 777 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 PTOV1Q86YD1 416 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 CTAGE4Q8IX94 777 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 MARVELD2Q8N4S9 558 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 ENAHQ8N8S7 591 aaPredicted RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 KIAA0895Q8NCT3 520 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 OR1J2Q8NGS2 313 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 LRTOMTQ8WZ04 291 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 DDB2Q92466 427 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 ANKS1AQ92625 1134 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 PHF21AQ96BD5 680 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 SPATA13Q96N96 652 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF583Q96ND8 569 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 KATNB1Q9BVA0 655 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 SPRTNQ9H040 489 aaPredicted RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 PARVAQ9NVD7 372 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 PIH1D1Q9NWS0 290 aaKnown RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 EBF1Q9UH73 591 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 ATXN7L1Q9ULK2 861 aaPredicted RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 CORO1CQ9ULV4 474 aaPredicted RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF232Q9UNY5 417 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 B3GALT5Q9Y2C3 310 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 MYBPHLA2RUH7 354 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 TSPAN1O60635 241 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 REM1O75628 298 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 SLC1A1P43005 524 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 FABP6P51161 128 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 KCNJ12Q14500 433 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 GBX1Q14549 363 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 VMACQ2NL98 169 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 ARL6IP4Q66PJ3 421 aaKnown RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 CYB5R2Q6BCY4 276 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 RHBDF2Q6PJF5 856 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 UBE2R2Q712K3 238 aaPredicted RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 APOLD1Q96LR9 279 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 PKP4Q99569 1192 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 RBM4Q9BWF3 364 aaKnown RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 CADM1Q9BY67 442 aaKnown RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 BCL2L14Q9BZR8 327 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 ZMYND12Q9H0C1 365 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 FOXP1Q9H334 677 aaPredicted RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 SP140LQ9H930 580 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 AGO3Q9H9G7 860 aaKnown RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 STARD5Q9NSY2 213 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 SPHK1Q9NYA1 384 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 TESQ9UGI8 421 aaKnown RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 FKBPLQ9UIM3 349 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 TUBD1Q9UJT1 453 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 C3orf18Q9UK00 162 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 MAPRE3Q9UPY8 281 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 RBM7Q9Y580 266 aaKnown RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 UBIAD1Q9Y5Z9 338 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 CSNK1G3Q9Y6M4 447 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 USH1CQ9Y6N9 552 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 F8W810 466 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 H0Y8X5 98 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 MPPED1O15442 326 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 SOAT2O75908 522 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 IL1AP01583 271 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 HLA-DRAP01903 254 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 ENO1P06733 434 aaKnown RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 ATXN1LP0C7T5 689 aaKnown RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 CCDC166P0CW27 439 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 GNLYP22749 145 aa3.45□□□□□ -1.86
TOP2A-201ENST00000423485 MLLT6P55198 1093 aaPredicted RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 ABCE1P61221 599 aaKnown RBP3.45□□□□□ -1.86
TOP2A-201ENST00000423485 HTRA4P83105 476 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms