RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 PLAGL1Q9UM63 463 aa8.31□□□□□ -1.08
MDC1-204ENST00000422266 CDC14AQ9UNH5 594 aa8.31□□□□□ -1.08
MDC1-204ENST00000422266 TP53TG5Q9Y2B4 290 aa8.31□□□□□ -1.08
MDC1-204ENST00000422266 DHRS7Q9Y394 339 aa8.31□□□□□ -1.08
MDC1-204ENST00000422266 SAR1BQ9Y6B6 198 aa8.31□□□□□ -1.08
MDC1-204ENST00000422266 FITM1A5D6W6 292 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 ARGFXA6NJG6 315 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 GOLGA8KD6RF30 607 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 H3BMH7 237 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 GOLGA8TH3BQL2 631 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 MYO1CO00159 1063 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 DSCR3O14972 297 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 NIPSNAP2O75323 286 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 ONECUT2O95948 504 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 CAPN1P07384 714 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 FURINP09958 794 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 ERGP11308 486 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 EZRP15311 586 aaKnown RBP8.3□□□□□ -1.08
MDC1-204ENST00000422266 CCND1P24385 295 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 PEBP1P30086 187 aaKnown RBP8.3□□□□□ -1.08
MDC1-204ENST00000422266 GRIA3P42263 894 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 CCL11P51671 97 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 TERF1P54274 439 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 GNG11P61952 73 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 RPS18P62269 152 aaKnown RBP8.3□□□□□ -1.08
MDC1-204ENST00000422266 TLE1Q04724 770 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 IL10RAQ13651 578 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 GRB7Q14451 532 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 ZIC1Q15915 447 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 MUM1Q2TAK8 710 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 DEFB110Q30KQ9 67 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 PTCHD3Q3KNS1 767 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 RNASEH2BQ5TBB1 312 aaKnown RBP8.3□□□□□ -1.08
MDC1-204ENST00000422266 PRAMEF17Q5VTA0 474 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 IRAK1BP1Q5VVH5 260 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 GARNL3Q5VVW2 1013 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 PAPD7Q5XG87 772 aaKnown RBP8.3□□□□□ -1.08
MDC1-204ENST00000422266 ZNF385CQ66K41 422 aaPredicted RBP8.3□□□□□ -1.08
MDC1-204ENST00000422266 ATCAYQ86WG3 371 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 PTRH1Q86Y79 214 aaKnown RBP8.3□□□□□ -1.08
MDC1-204ENST00000422266 BBOF1Q8ND07 529 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 MCOLN3Q8TDD5 553 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 COG1Q8WTW3 980 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 RERGQ96A58 199 aaPredicted RBP8.3□□□□□ -1.08
MDC1-204ENST00000422266 SIGLEC10Q96LC7 697 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 NAPGQ99747 312 aaPredicted RBP8.3□□□□□ -1.08
MDC1-204ENST00000422266 ZFYVE21Q9BQ24 234 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 SPRTNQ9H040 489 aaPredicted RBP8.3□□□□□ -1.08
MDC1-204ENST00000422266 SLC26A1Q9H2B4 701 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 AKIRIN1Q9H9L7 192 aaPredicted RBP8.3□□□□□ -1.08
MDC1-204ENST00000422266 MRPS30Q9NP92 439 aaKnown RBP8.3□□□□□ -1.08
MDC1-204ENST00000422266 GPR83Q9NYM4 423 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 TRMT6Q9UJA5 497 aaKnown RBP8.3□□□□□ -1.08
MDC1-204ENST00000422266 PTRH2Q9Y3E5 179 aaKnown RBP8.3□□□□□ -1.08
MDC1-204ENST00000422266 NFS1Q9Y697 457 aa8.3□□□□□ -1.08
MDC1-204ENST00000422266 TLN1Q9Y490 2541 aaKnown RBP8.3□□□□□ -1.08
MDC1-204ENST00000422266 SPTBP11277 2137 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 OR2A25A4D2G3 310 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 GFYI3L273 518 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 SLC16A5O15375 505 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 PRICKLE3O43900 615 aaPredicted RBP8.29□□□□□ -1.08
MDC1-204ENST00000422266 KLF7O75840 302 aaPredicted RBP8.29□□□□□ -1.08
MDC1-204ENST00000422266 CEACAM4O75871 244 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 C8GP07360 202 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 HIST1H2AGP0C0S8 130 aaPredicted RBP8.29□□□□□ -1.08
MDC1-204ENST00000422266 HIST1H2ADP20671 130 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 SLC1A2P43004 574 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 PTGIRP43119 386 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 CARSP49589 748 aaKnown RBP8.29□□□□□ -1.08
MDC1-204ENST00000422266 CLCN7P51798 805 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 PNLIPRP1P54315 467 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 ARL4CP56559 192 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 AP2B1P63010 937 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 DR1Q01658 176 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 OCA2Q04671 838 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 PRDX1Q06830 199 aaKnown RBP8.29□□□□□ -1.08
MDC1-204ENST00000422266 AIMP2Q13155 320 aaKnown RBP8.29□□□□□ -1.08
MDC1-204ENST00000422266 SP140Q13342 867 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 CTBP1Q13363 440 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 FRG1Q14331 258 aaKnown RBP8.29□□□□□ -1.08
MDC1-204ENST00000422266 CRYMQ14894 314 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 NDUFA9Q16795 377 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 HSP90AA5PQ58FG0 334 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 ACSBG2Q5FVE4 666 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 VWA5B1Q5TIE3 1220 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 MRPL14Q6P1L8 145 aaKnown RBP8.29□□□□□ -1.08
MDC1-204ENST00000422266 TTLL10Q6ZVT0 673 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 RNF44Q7L0R7 432 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 OVCH1Q7RTY7 1134 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 TAX1BP1Q86VP1 789 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 CNTN4Q8IWV2 1026 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 MYO1HQ8N1T3 1032 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 C17orf53Q8N3J3 647 aaPredicted RBP8.29□□□□□ -1.08
MDC1-204ENST00000422266 C2orf73Q8N5S3 287 aaPredicted RBP8.29□□□□□ -1.08
MDC1-204ENST00000422266 EFCAB3Q8N7B9 438 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 GPATCH11Q8N954 259 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 C2CD4AQ8NCU7 369 aaPredicted RBP8.29□□□□□ -1.08
MDC1-204ENST00000422266 OR2A1Q8NGT9 310 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 ASB11Q8WXH4 323 aa8.29□□□□□ -1.08
MDC1-204ENST00000422266 HIST1H2AHQ96KK5 128 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms