RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 SF1Q15637 639 aaKnown RBP16.94■□□□□ 0.3
LINC00271-201ENST00000421378 C18orf21Q32NC0 220 aaPredicted RBP16.94■□□□□ 0.3
LINC00271-201ENST00000421378 FBXO48Q5FWF7 155 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 FAM92BQ6ZTR7 304 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 ATP6V1G3Q96LB4 118 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 OR2A14Q96R47 310 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 TMEM79Q9BSE2 394 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 ACAT2Q9BWD1 397 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 SGPP1Q9BX95 441 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 C12orf65Q9H3J6 166 aaKnown RBP16.94■□□□□ 0.3
LINC00271-201ENST00000421378 TAC3Q9UHF0 121 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 TLCD2A6NGC4 264 aa16.93■□□□□ 0.3
LINC00271-201ENST00000421378 TAPBPO15533 448 aa16.93■□□□□ 0.3
LINC00271-201ENST00000421378 PRICKLE3O43900 615 aaPredicted RBP16.93■□□□□ 0.3
LINC00271-201ENST00000421378 RASSF9O75901 435 aa16.93■□□□□ 0.3
LINC00271-201ENST00000421378 GGT5P36269 586 aa16.93■□□□□ 0.3
LINC00271-201ENST00000421378 SLC6A12P48065 614 aa16.93■□□□□ 0.3
LINC00271-201ENST00000421378 HSPA7P48741 367 aa16.93■□□□□ 0.3
LINC00271-201ENST00000421378 PUM1Q14671 1186 aaKnown RBP eCLIP16.93■□□□□ 0.3
LINC00271-201ENST00000421378 SETDB1Q15047 1291 aa16.93■□□□□ 0.3
LINC00271-201ENST00000421378 PRAMEF13Q5VWM6 474 aa16.93■□□□□ 0.3
LINC00271-201ENST00000421378 ZNF574Q6ZN55 896 aaPredicted RBP16.93■□□□□ 0.3
LINC00271-201ENST00000421378 PTGR2Q8N8N7 351 aaPredicted RBP16.93■□□□□ 0.3
LINC00271-201ENST00000421378 OR2A1Q8NGT9 310 aa16.93■□□□□ 0.3
LINC00271-201ENST00000421378 FLVCR1-AS1Q8TAF5 88 aa16.93■□□□□ 0.3
LINC00271-201ENST00000421378 RDH11Q8TC12 318 aa16.93■□□□□ 0.3
LINC00271-201ENST00000421378 PHF21BQ96EK2 531 aa16.93■□□□□ 0.3
LINC00271-201ENST00000421378 FAM111AQ96PZ2 611 aa16.93■□□□□ 0.3
LINC00271-201ENST00000421378 PCBD2Q9H0N5 130 aa16.93■□□□□ 0.3
LINC00271-201ENST00000421378 INTS7Q9NVH2 962 aaKnown RBP16.93■□□□□ 0.3
LINC00271-201ENST00000421378 SLC17A7Q9P2U7 560 aa16.93■□□□□ 0.3
LINC00271-201ENST00000421378 IGHV5-10-1A0A0J9YXX1 117 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 A8MT66 165 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 PRPF4O43172 522 aaKnown RBP eCLIP16.92■□□□□ 0.3
LINC00271-201ENST00000421378 ATP8B1O43520 1251 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 STK16O75716 305 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 WDR47O94967 919 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 THRAP10827 490 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 CDH3P22223 829 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 HOXD11P31277 338 aaPredicted RBP16.92■□□□□ 0.3
LINC00271-201ENST00000421378 GDF5P43026 501 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 AGTR2P50052 363 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 PDX1P52945 283 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 NFKB2Q00653 900 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 SLC5A12Q1EHB4 618 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 TTMPQ5BVD1 217 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 SNAP47Q5SQN1 464 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 HES3Q5TGS1 186 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 SLITRK4Q8IW52 837 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 ARMC2Q8NEN0 867 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 OR2L3Q8NG85 312 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 UBTD2Q8WUN7 234 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 ESAMQ96AP7 390 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 MAP3K3Q99759 626 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 MIPEPQ99797 713 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 PITPNM3Q9BZ71 974 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 CD244Q9BZW8 370 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 KCNK9Q9NPC2 374 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 PDP2Q9P2J9 529 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 MID2Q9UJV3 735 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 SLC22A14Q9Y267 594 aa16.92■□□□□ 0.3
LINC00271-201ENST00000421378 COL27A1Q8IZC6 1860 aaPredicted RBP16.92■□□□□ 0.3
LINC00271-201ENST00000421378 HMGB1P1B2RPK0 211 aaPredicted RBP16.91■□□□□ 0.3
LINC00271-201ENST00000421378 STX16-NPEPL1H3BU86 382 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 STX16O14662 325 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 TM9SF1O15321 606 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 TOX3O15405 576 aaPredicted RBP16.91■□□□□ 0.3
LINC00271-201ENST00000421378 KIF1CO43896 1103 aaKnown RBP16.91■□□□□ 0.3
LINC00271-201ENST00000421378 CCNDBP1O95273 360 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 MYL2P10916 166 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 ATP5F1P24539 256 aaPredicted RBP16.91■□□□□ 0.3
LINC00271-201ENST00000421378 CLDN6P56747 220 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 PHF19Q5T6S3 580 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 CDCP2Q5VXM1 449 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 ICE2Q659A1 982 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 LCTLQ6UWM7 567 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 PRSS42Q7Z5A4 293 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 B3GNT8Q7Z7M8 397 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 TRIM73Q86UV7 250 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 THOC6Q86W42 341 aaKnown RBP16.91■□□□□ 0.3
LINC00271-201ENST00000421378 CARFQ8N187 725 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 CCDC74BQ96LY2 380 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 PPM1MQ96MI6 270 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 TMEM74Q96NL1 305 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 HAUS8Q9BT25 410 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 SEMA6CQ9H3T2 930 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 C1GALT1Q9NS00 363 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 COPG2Q9UBF2 871 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 CLCA2Q9UQC9 943 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 ASB1Q9Y576 335 aa16.91■□□□□ 0.3
LINC00271-201ENST00000421378 TNPO3Q9Y5L0 923 aaKnown RBP16.91■□□□□ 0.3
LINC00271-201ENST00000421378 A0A0J9YY10 115 aa16.9■□□□□ 0.3
LINC00271-201ENST00000421378 G3V2L1 256 aa16.9■□□□□ 0.3
LINC00271-201ENST00000421378 DLX3O60479 287 aa16.9■□□□□ 0.3
LINC00271-201ENST00000421378 CCNT2O60583 730 aaKnown RBP16.9■□□□□ 0.3
LINC00271-201ENST00000421378 ZWINTO95229 277 aa16.9■□□□□ 0.3
LINC00271-201ENST00000421378 FKBP9O95302 570 aa16.9■□□□□ 0.3
LINC00271-201ENST00000421378 CMPK1P30085 196 aa16.9■□□□□ 0.3
LINC00271-201ENST00000421378 PRDX1Q06830 199 aaKnown RBP16.9■□□□□ 0.3
LINC00271-201ENST00000421378 ZFP36L1Q07352 338 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms