RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 PHF10Q8WUB8 498 aaKnown RBP11.42□□□□□ -0.58
DDR1-232ENST00000418800 GTPBP3Q969Y2 492 aaKnown RBP11.42□□□□□ -0.58
DDR1-232ENST00000418800 OTULINQ96BN8 352 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 PANX1Q96RD7 426 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 POLR1EQ9GZS1 481 aaKnown RBP11.42□□□□□ -0.58
DDR1-232ENST00000418800 ELOVL6Q9H5J4 265 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 NMRK2Q9NPI5 230 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 SH3BP4Q9P0V3 963 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 RBPJLQ9UBG7 517 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 ABCD2Q9UBJ2 740 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 FAM92AA1XBS5 289 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 KIAA0513O60268 411 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 SLC25A27O95847 323 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 HMGB2P26583 209 aaKnown RBP11.42□□□□□ -0.58
DDR1-232ENST00000418800 PSMD8P48556 350 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 TGM4P49221 684 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 ACOX1Q15067 660 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 TIGD5Q53EQ6 642 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 POF1BQ8WVV4 589 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 SLC2A13Q96QE2 648 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 TM6SF2Q9BZW4 377 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 SLC7A5P2Q9GIP4 190 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 IL1RAPQ9NPH3 570 aa11.42□□□□□ -0.58
DDR1-232ENST00000418800 FAM240BA0A1B0GVZ2 78 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 ASPDHA6ND91 283 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 RPP40O75818 363 aaKnown RBP11.41□□□□□ -0.58
DDR1-232ENST00000418800 AP2A2O94973 939 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 PGRP06401 933 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 SMIM10L2AP0DMW4 78 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 SMIM10L2BP0DMW5 78 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 MTHFD2P13995 350 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 RPS3P23396 243 aaKnown RBP eCLIP11.41□□□□□ -0.584e-7■■■□□ 18.1
DDR1-232ENST00000418800 KRT20P35900 424 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 GPR15P49685 360 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 ABATP80404 500 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 CREMQ03060 361 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 ARMC12Q5T9G4 340 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 TRIQKQ629K1 86 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 FAM151BQ6UXP7 276 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 WDR36Q8NI36 951 aaKnown RBP11.41□□□□□ -0.58
DDR1-232ENST00000418800 MRPL9Q9BYD2 267 aaKnown RBP11.41□□□□□ -0.58
DDR1-232ENST00000418800 FBXO8Q9NRD0 319 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 ZNF222Q9UK12 451 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 LOXHD1Q8IVV2 1947 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 POLR2AP24928 1970 aaKnown RBP11.41□□□□□ -0.58
DDR1-232ENST00000418800 TCRBV5S2A0A599 114 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 F8W810 466 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 EEDO75530 441 aaKnown RBP11.41□□□□□ -0.58
DDR1-232ENST00000418800 TP53P04637 393 aaPredicted RBP11.41□□□□□ -0.58
DDR1-232ENST00000418800 PKMP14618 531 aaKnown RBP11.41□□□□□ -0.58
DDR1-232ENST00000418800 MYL9P24844 172 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 RRM2P31350 389 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 CSTF3Q12996 717 aaKnown RBP11.41□□□□□ -0.58
DDR1-232ENST00000418800 PRSS36Q5K4E3 855 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 KANK2Q63ZY3 851 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 CNDP2Q96KP4 475 aaKnown RBP11.41□□□□□ -0.58
DDR1-232ENST00000418800 ZNF583Q96ND8 569 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 IL4I1Q96RQ9 567 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 TMEM161AQ9NX61 479 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 SPATA2Q9UM82 520 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 SLC9A8Q9Y2E8 581 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 IRAK2O43187 625 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 KERAO60938 352 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 OR1E2P47887 323 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 RPP38P78345 283 aaKnown RBP11.41□□□□□ -0.58
DDR1-232ENST00000418800 INTS6LQ5JSJ4 861 aaKnown RBP11.41□□□□□ -0.58
DDR1-232ENST00000418800 CCDC149Q6ZUS6 474 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 FAM109AQ8N4B1 249 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 RTL3Q8N8U3 475 aaKnown RBP11.41□□□□□ -0.58
DDR1-232ENST00000418800 ZNF599Q96NL3 588 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 AARSD1Q9BTE6 412 aaKnown RBP11.41□□□□□ -0.58
DDR1-232ENST00000418800 MFSD1Q9H3U5 465 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 ABCB8Q9NUT2 735 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 KCNH4Q9UQ05 1017 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 LYVE1Q9Y5Y7 322 aa11.41□□□□□ -0.58
DDR1-232ENST00000418800 A0A0C4DFX4 3053 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 A0A1W2PQ09 198 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 ERVH48-1M5A8F1 160 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 AREL1O15033 823 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 KPNA5O15131 536 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 RGS14O43566 566 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 CKMT1AP12532 417 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 ZNF45Q02386 682 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 GTF2H2Q13888 395 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 ZMYND11Q15326 602 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 OR4F3Q6IEY1 312 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 GTF2H2CQ6P1K8 395 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 PNCKQ6P2M8 343 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 CEP68Q76N32 757 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 GPR65Q8IYL9 337 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 TMEM132CQ8N3T6 1108 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 ATAD1Q8NBU5 361 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 RASSF5Q8WWW0 418 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 FUBP1Q96AE4 644 aaKnown RBP11.4□□□□□ -0.58
DDR1-232ENST00000418800 TMCO6Q96DC7 493 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 DUS3LQ96G46 650 aaKnown RBP11.4□□□□□ -0.58
DDR1-232ENST00000418800 SNX18Q96RF0 628 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 CLPBQ9H078 707 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 NARFLQ9H6Q4 476 aa11.4□□□□□ -0.58
DDR1-232ENST00000418800 QPCTLQ9NXS2 382 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms