RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 CRIP3Q6Q6R5 217 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 LINGO4Q6UY18 593 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 LEKR1Q6ZMV7 388 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 PTCHD4Q6ZW05 846 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 RAB11FIP2Q7L804 512 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 PID1Q7Z2X4 250 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 ADIPOR2Q86V24 386 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 RALGPS2Q86X27 583 aaPredicted RBP5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 P3H2Q8IVL5 708 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 ULK2Q8IYT8 1036 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 ZNF567Q8N184 647 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 BBS5Q8N3I7 341 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 TEX26Q8N6G2 289 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 ABHD11Q8NFV4 315 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 CCDC110Q8TBZ0 833 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 CHFRQ96EP1 664 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 SPATA13Q96N96 652 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 AGAP3Q96P47 875 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 RHOXF2Q9BQY4 288 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 ERP44Q9BS26 406 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 TRIM51Q9BSJ1 452 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 RAB17Q9H0T7 212 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 C8orf33Q9H7E9 229 aaPredicted RBP5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 NT5MQ9NPB1 228 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 RBM22Q9NW64 420 aaKnown RBP eCLIP5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 ELOVL2Q9NXB9 296 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 PAK5Q9P286 719 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 KIF17Q9P2E2 1029 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 KLHL8Q9P2G9 620 aaPredicted RBP5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 MGAT4CQ9UBM8 478 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 ASIC3Q9UHC3 531 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 ERVW-1Q9UQF0 538 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 UTP11Q9Y3A2 253 aaKnown RBP5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 V9GYY5 206 aaPredicted RBP5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 MYOFQ9NZM1 2061 aa5.85□□□□□ -1.47
NIFKP3-201ENST00000417799 SPTBN5Q9NRC6 3674 aaKnown RBP5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 KIF26AQ9ULI4 1882 aaPredicted RBP5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 TBC1D3BA6NDS4 549 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 PRRT4C9JH25 899 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 SPECC1L-ADORA2AF8WAN1 911 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 K7ERQ8 282 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 QSOX1O00391 747 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 CTIFO43310 598 aaKnown RBP5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 TMPRSS11DO60235 418 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 RPP40O75818 363 aaKnown RBP5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 TMCC1O94876 653 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 KAT7O95251 611 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 CER1O95813 267 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 APODP05090 189 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 HLA-DQB2P05538 268 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 ADRA1DP25100 572 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 FDFT1P37268 417 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 HSPA9P38646 679 aaKnown RBP5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 RPL21P46778 160 aaKnown RBP5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 VPS41P49754 854 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 SERPINH1P50454 418 aaKnown RBP5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 DRG2P55039 364 aaKnown RBP5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 ECT2LQ008S8 904 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 GUCY2DQ02846 1103 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 ZNF235Q14590 738 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 CYTH1Q15438 398 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 PARP6Q2NL67 630 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 ZXDCQ2QGD7 858 aaPredicted RBP5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 HECTD2Q5U5R9 776 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 FAM90A2PQ658T7 463 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 ITPRIPL1Q6GPH6 555 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 CCDC144NLQ6NUI1 221 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 ZNF627Q7L945 461 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 TRABD2AQ86V40 505 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 MOGAT3Q86VF5 341 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 IFT20Q8IY31 132 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 PGBD5Q8N414 524 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 TERB1Q8NA31 727 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 KDM1BQ8NB78 822 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 BBOF1Q8ND07 529 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 UCMAQ8WVF2 138 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 NEU4Q8WWR8 484 aaPredicted RBP5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 SLC9A6Q92581 669 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 EXOC4Q96A65 974 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 ISG20Q96AZ6 181 aaKnown RBP5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 LRRC45Q96CN5 670 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 SNF8Q96H20 258 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 ZNF419Q96HQ0 510 aaPredicted RBP5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 TRAPPC9Q96Q05 1148 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 PSKH2Q96QS6 385 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 P2RY13Q9BPV8 354 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 CINPQ9BW66 212 aaPredicted RBP5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 TRIM31Q9BZY9 425 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 CIPCQ9C0C6 399 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 GBA3Q9H227 469 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 DPH5Q9H2P9 285 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 ANKZF1Q9H8Y5 726 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 EPB41L5Q9HCM4 733 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 GDF3Q9NR23 364 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 HEBP1Q9NRV9 189 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 FAM114A2Q9NRY5 505 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 HAUS2Q9NVX0 235 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 RSPH14Q9UHP6 348 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 SLCO3A1Q9UIG8 710 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 SLC25A13Q9UJS0 675 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms