RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 FNTAP49354 379 aa24.29■■□□□ 1.48
VEGFA-208ENST00000417285 SOX8P57073 446 aa24.29■■□□□ 1.48
VEGFA-208ENST00000417285 DHX34Q14147 1143 aaKnown RBP24.29■■□□□ 1.48
VEGFA-208ENST00000417285 NAA25Q14CX7 972 aa24.29■■□□□ 1.48
VEGFA-208ENST00000417285 VWA5B1Q5TIE3 1220 aa24.29■■□□□ 1.48
VEGFA-208ENST00000417285 ZNF669Q96BR6 464 aaPredicted RBP24.29■■□□□ 1.48
VEGFA-208ENST00000417285 SERPINB12Q96P63 405 aa24.29■■□□□ 1.48
VEGFA-208ENST00000417285 SELENOSQ9BQE4 189 aa24.29■■□□□ 1.48
VEGFA-208ENST00000417285 WDR54Q9H977 334 aa24.29■■□□□ 1.48
VEGFA-208ENST00000417285 CUTCQ9NTM9 273 aa24.29■■□□□ 1.48
VEGFA-208ENST00000417285 INTS10Q9NVR2 710 aaKnown RBP24.29■■□□□ 1.48
VEGFA-208ENST00000417285 SPATA7Q9P0W8 599 aa24.29■■□□□ 1.48
VEGFA-208ENST00000417285 CRYL1Q9Y2S2 319 aa24.29■■□□□ 1.48
VEGFA-208ENST00000417285 DOPEY2Q9Y3R5 2298 aa24.29■■□□□ 1.48
VEGFA-208ENST00000417285 GOLGA8MH3BSY2 632 aa24.28■■□□□ 1.48
VEGFA-208ENST00000417285 DSCR3O14972 297 aa24.28■■□□□ 1.48
VEGFA-208ENST00000417285 SORBS2O94875 1100 aaKnown RBP24.28■■□□□ 1.48
VEGFA-208ENST00000417285 ALPPP05187 535 aa24.28■■□□□ 1.48
VEGFA-208ENST00000417285 GBX1Q14549 363 aa24.28■■□□□ 1.48
VEGFA-208ENST00000417285 ANKRD20A4Q4UJ75 823 aa24.28■■□□□ 1.48
VEGFA-208ENST00000417285 CILP2Q8IUL8 1156 aa24.28■■□□□ 1.48
VEGFA-208ENST00000417285 GALNT16Q8N428 558 aa24.28■■□□□ 1.48
VEGFA-208ENST00000417285 TTC29Q8NA56 475 aaPredicted RBP24.28■■□□□ 1.48
VEGFA-208ENST00000417285 PNPLA2Q96AD5 504 aa24.28■■□□□ 1.48
VEGFA-208ENST00000417285 SLC26A1Q9H2B4 701 aa24.28■■□□□ 1.48
VEGFA-208ENST00000417285 ATP13A2Q9NQ11 1180 aa24.28■■□□□ 1.48
VEGFA-208ENST00000417285 SLAMF7Q9NQ25 335 aa24.28■■□□□ 1.48
VEGFA-208ENST00000417285 SLC22A11Q9NSA0 550 aa24.28■■□□□ 1.48
VEGFA-208ENST00000417285 SNX12Q9UMY4 172 aa24.28■■□□□ 1.48
VEGFA-208ENST00000417285 RELNP78509 3460 aa24.28■■□□□ 1.48
VEGFA-208ENST00000417285 FITM1A5D6W6 292 aa24.27■■□□□ 1.48
VEGFA-208ENST00000417285 CNOT3O75175 753 aaKnown RBP24.27■■□□□ 1.48
VEGFA-208ENST00000417285 NIPSNAP2O75323 286 aa24.27■■□□□ 1.48
VEGFA-208ENST00000417285 THOC5Q13769 683 aaKnown RBP24.27■■□□□ 1.48
VEGFA-208ENST00000417285 MYBPC3Q14896 1274 aa24.27■■□□□ 1.48
VEGFA-208ENST00000417285 SLC9A5Q14940 896 aa24.27■■□□□ 1.48
VEGFA-208ENST00000417285 CYP2A13Q16696 494 aa24.27■■□□□ 1.48
VEGFA-208ENST00000417285 CCSMST1Q4G0I0 132 aa24.27■■□□□ 1.48
VEGFA-208ENST00000417285 CNSTQ6PJW8 725 aa24.27■■□□□ 1.48
VEGFA-208ENST00000417285 OR2L3Q8NG85 312 aa24.27■■□□□ 1.48
VEGFA-208ENST00000417285 OR2A1Q8NGT9 310 aa24.27■■□□□ 1.48
VEGFA-208ENST00000417285 FAM114A2Q9NRY5 505 aa24.27■■□□□ 1.48
VEGFA-208ENST00000417285 TRMT1Q9NXH9 659 aaKnown RBP24.27■■□□□ 1.48
VEGFA-208ENST00000417285 E5RI56 91 aa24.26■■□□□ 1.47
VEGFA-208ENST00000417285 IPO13O94829 963 aaKnown RBP24.26■■□□□ 1.47
VEGFA-208ENST00000417285 UMODP07911 640 aa24.26■■□□□ 1.47
VEGFA-208ENST00000417285 ATXN8OSP0DMR3 200 aa24.26■■□□□ 1.47
VEGFA-208ENST00000417285 PKMP14618 531 aaKnown RBP24.26■■□□□ 1.47
VEGFA-208ENST00000417285 HSD17B2P37059 387 aa24.26■■□□□ 1.47
VEGFA-208ENST00000417285 BDKRB1P46663 353 aa24.26■■□□□ 1.47
VEGFA-208ENST00000417285 INPP5JQ15735 1006 aaPredicted RBP24.26■■□□□ 1.47
VEGFA-208ENST00000417285 ZNF470Q6ECI4 717 aa24.26■■□□□ 1.47
VEGFA-208ENST00000417285 CENPUQ71F23 418 aa24.26■■□□□ 1.47
VEGFA-208ENST00000417285 PPP1R32Q7Z5V6 425 aa24.26■■□□□ 1.47
VEGFA-208ENST00000417285 RBMXL3Q8N7X1 1067 aaKnown RBP24.26■■□□□ 1.47
VEGFA-208ENST00000417285 NAT8LQ8N9F0 302 aa24.26■■□□□ 1.47
VEGFA-208ENST00000417285 OR9A1PQ8NGU1 263 aa24.26■■□□□ 1.47
VEGFA-208ENST00000417285 MIPEPQ99797 713 aa24.26■■□□□ 1.47
VEGFA-208ENST00000417285 TRIM56Q9BRZ2 755 aaKnown RBP24.26■■□□□ 1.47
VEGFA-208ENST00000417285 KCNF1Q9H3M0 494 aa24.26■■□□□ 1.47
VEGFA-208ENST00000417285 KLHL42Q9P2K6 505 aa24.26■■□□□ 1.47
VEGFA-208ENST00000417285 NXT1Q9UKK6 140 aaKnown RBP24.26■■□□□ 1.47
VEGFA-208ENST00000417285 FAM169AQ9Y6X4 670 aa24.26■■□□□ 1.47
VEGFA-208ENST00000417285 CTAGE9A4FU28 777 aa24.25■■□□□ 1.47
VEGFA-208ENST00000417285 AGPSO00116 658 aa24.25■■□□□ 1.47
VEGFA-208ENST00000417285 CTSVO60911 334 aa24.25■■□□□ 1.47
VEGFA-208ENST00000417285 MMP11P24347 488 aa24.25■■□□□ 1.47
VEGFA-208ENST00000417285 MAGEA3P43357 314 aa24.25■■□□□ 1.47
VEGFA-208ENST00000417285 SRSF1Q07955 248 aaKnown RBP eCLIP24.25■■□□□ 1.471e-7■■■□□ 14.7
VEGFA-208ENST00000417285 ARHGAP19Q14CB8 494 aa24.25■■□□□ 1.47
VEGFA-208ENST00000417285 PPP1R7Q15435 360 aa24.25■■□□□ 1.47
VEGFA-208ENST00000417285 WASHC2DQ5SRD0 308 aa24.25■■□□□ 1.47
VEGFA-208ENST00000417285 IGFL3Q6UXB1 125 aa24.25■■□□□ 1.47
VEGFA-208ENST00000417285 PPIL6Q8IXY8 311 aa24.25■■□□□ 1.47
VEGFA-208ENST00000417285 FAM136AQ96C01 138 aa24.25■■□□□ 1.47
VEGFA-208ENST00000417285 VPS50Q96JG6 964 aa24.25■■□□□ 1.47
VEGFA-208ENST00000417285 MFRPQ9BY79 579 aa24.25■■□□□ 1.47
VEGFA-208ENST00000417285 TSR3Q9UJK0 312 aaKnown RBP24.25■■□□□ 1.47
VEGFA-208ENST00000417285 RUVBL2Q9Y230 463 aaKnown RBP24.25■■□□□ 1.47
VEGFA-208ENST00000417285 MAD1L1Q9Y6D9 718 aa24.25■■□□□ 1.47
VEGFA-208ENST00000417285 USP1O94782 785 aa24.24■■□□□ 1.47
VEGFA-208ENST00000417285 ITGAXP20702 1163 aa24.24■■□□□ 1.47
VEGFA-208ENST00000417285 CMPK1P30085 196 aa24.24■■□□□ 1.47
VEGFA-208ENST00000417285 VSX2P58304 361 aaPredicted RBP24.24■■□□□ 1.47
VEGFA-208ENST00000417285 RAPSNQ13702 412 aa24.24■■□□□ 1.47
VEGFA-208ENST00000417285 NKG7Q16617 165 aa24.24■■□□□ 1.47
VEGFA-208ENST00000417285 TTLL9Q3SXZ7 439 aa24.24■■□□□ 1.47
VEGFA-208ENST00000417285 SLC6A19Q695T7 634 aa24.24■■□□□ 1.47
VEGFA-208ENST00000417285 NEK10Q6ZWH5 1172 aa24.24■■□□□ 1.47
VEGFA-208ENST00000417285 LMNTD2Q8IXW0 634 aa24.24■■□□□ 1.47
VEGFA-208ENST00000417285 SMPDL3AQ92484 453 aa24.24■■□□□ 1.47
VEGFA-208ENST00000417285 TM9SF4Q92544 642 aa24.24■■□□□ 1.47
VEGFA-208ENST00000417285 COL26A1Q96A83 441 aa24.24■■□□□ 1.47
VEGFA-208ENST00000417285 CCDC68Q9H2F9 335 aa24.24■■□□□ 1.47
VEGFA-208ENST00000417285 UTP20O75691 2785 aaKnown RBP24.24■■□□□ 1.47
VEGFA-208ENST00000417285 TNRC6AQ8NDV7 1962 aaKnown RBP24.23■■□□□ 1.47
VEGFA-208ENST00000417285 SPTAN1Q13813 2472 aaKnown RBP24.23■■□□□ 1.47
VEGFA-208ENST00000417285 ZCWPW2A0A1B0GU75 182 aa24.23■■□□□ 1.47
VEGFA-208ENST00000417285 A0A1W2PPV9 198 aa24.23■■□□□ 1.47
VEGFA-208ENST00000417285 HYKKA2RU49 373 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms