RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 SNX4O95219 450 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 ITGB1P05556 798 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 SLC2A4P14672 509 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 MYL9P24844 172 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 SLC19A1P41440 591 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 PIK3CGP48736 1102 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 MAPK12P53778 367 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 PURAQ00577 322 aaKnown RBP14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 ELP6Q0PNE2 266 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 GRIK2Q13002 908 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 MED22Q15528 200 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 FAM187BQ17R55 369 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 AP5B1Q2VPB7 878 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 ZC3H12BQ5HYM0 836 aaKnown RBP14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 KIAA1614Q5VZ46 1190 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 PAQR3Q6TCH7 311 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 RANBP10Q6VN20 620 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 Q6ZSR9 355 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 GPRIN3Q6ZVF9 776 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 GET4Q7L5D6 327 aaPredicted RBP14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 VN1R5Q7Z5H4 357 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 SLC51BQ86UW2 128 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 STX19Q8N4C7 294 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 ZNF557Q8N988 423 aaPredicted RBP14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 IPCEF1Q8WWN9 437 aaPredicted RBP14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 NT5C3BQ969T7 300 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 KCNC2Q96PR1 638 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 SYTL2Q9HCH5 934 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 TMLHEQ9NVH6 421 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 IKZF3Q9UKT9 509 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 VPS4AQ9UN37 437 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 CDH23Q9H251 3354 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 BTN3A1O00481 513 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 ERN1O75460 977 aaKnown RBP14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 RHOBTB1O94844 696 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 SCELO95171 688 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 SLC10A3P09131 477 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 SLC2A3P11169 496 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 RPL38P63173 70 aaKnown RBP14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 HTRA3P83110 453 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 KEAP1Q14145 624 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 SLC14A2Q15849 920 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 RFTN2Q52LD8 501 aaPredicted RBP14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 SHQ1Q6PI26 577 aaKnown RBP14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 FAM217AQ8IXS0 508 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 PGBD5Q8N414 524 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 ZMIZ2Q8NF64 920 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 STAG3L4Q8TBR4 150 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 COQ8BQ96D53 544 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 PYURFQ96I23 114 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 CCDC32Q9BV29 185 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 ACTL8Q9H568 366 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 DYRK4Q9NR20 520 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 ABCB8Q9NUT2 735 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 CCDC59Q9P031 241 aaKnown RBP14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 ZNF451Q9Y4E5 1061 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 ASB1Q9Y576 335 aa14.34□□□□□ -0.11
NCKIPSD-204ENST00000416649 A0A0C4DFX4 3053 aa14.33□□□□□ -0.11
NCKIPSD-204ENST00000416649 ZSWIM8A7E2V4 1837 aa14.33□□□□□ -0.11
NCKIPSD-204ENST00000416649 OR2B3O76000 313 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 TPPPO94811 219 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 PTHP01270 115 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 CCND3P30281 292 aaPredicted RBP14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 AKT1P31749 480 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 ADRA1AP35348 466 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 MAGEA11P43364 429 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 PROX2Q3B8N5 592 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 XKR7Q5GH72 579 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 INTS6LQ5JSJ4 861 aaKnown RBP14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 CACHD1Q5VU97 1274 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 TSPYL5Q86VY4 417 aaPredicted RBP14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 ENTHD1Q8IYW4 607 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 C10orf111Q8N326 155 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 OR8J3Q8NGG0 315 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 HASPINQ8TF76 798 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 CYP2S1Q96SQ9 504 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 ZBTB18Q99592 522 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 GDF15Q99988 308 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 HDHD5Q9BXW7 423 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 NT5MQ9NPB1 228 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 NDFIP2Q9NV92 336 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 MIOSQ9NXC5 875 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 PCDHB5Q9Y5E4 795 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 A3GALT2U3KPV4 340 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 SMIM28A0A1B0GU29 152 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 PER2O15055 1255 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 CNPP09543 421 aaKnown RBP14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 NPR3P17342 541 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 TIE1P35590 1138 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 CD86P42081 329 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 TGM4P49221 684 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 DMC1Q14565 340 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 ESCO2Q56NI9 601 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 SPANXN4Q5MJ08 99 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 OR2T5Q6IEZ7 315 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 GDF6Q6KF10 455 aaPredicted RBP14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 TMPRSS11AQ6ZMR5 421 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 ANKRD46Q86W74 232 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 FBXL6Q8N531 539 aa14.33□□□□□ -0.12
NCKIPSD-204ENST00000416649 OR2T29Q8NH02 315 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms