RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 CNTN2Q02246 1040 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 GUCA2AQ02747 115 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 DLG1Q12959 904 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 GAGE1Q13065 139 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 LRRC14Q15048 493 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 ADNP2Q6IQ32 1131 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 CLEC9AQ6UXN8 241 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 TMEM26Q6ZUK4 368 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 TRAPPC11Q7Z392 1133 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 GPR180Q86V85 440 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 SATL1Q86VE3 508 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 WDR5BQ86VZ2 330 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 TMEM17Q86X19 198 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 PLD3Q8IV08 490 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 RNF113BQ8IZP6 322 aaKnown RBP6.55□□□□□ -1.36
CLIP4-205ENST00000415891 GHDCQ8N2G8 530 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 CLIP4Q8N3C7 705 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 CADM2Q8N3J6 435 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 ELP5Q8TE02 316 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 FAM172AQ8WUF8 416 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 CASKIN2Q8WXE0 1202 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 DYDC2Q96IM9 177 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 NECTIN4Q96NY8 510 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 GCNAQ96QF7 691 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 ELF4Q99607 663 aaPredicted RBP6.55□□□□□ -1.36
CLIP4-205ENST00000415891 NAT9Q9BTE0 207 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 IFT27Q9BW83 186 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 MROQ9BYG7 248 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 DNTTIP1Q9H147 329 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 POLR3FQ9H1D9 316 aaPredicted RBP6.55□□□□□ -1.36
CLIP4-205ENST00000415891 ESRP2Q9H6T0 727 aaKnown RBP6.55□□□□□ -1.36
CLIP4-205ENST00000415891 DCP1AQ9NPI6 582 aaPredicted RBP6.55□□□□□ -1.36
CLIP4-205ENST00000415891 ABCB10Q9NRK6 738 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 TREM2Q9NZC2 230 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 MRPL15Q9P015 296 aaKnown RBP6.55□□□□□ -1.36
CLIP4-205ENST00000415891 IMPACTQ9P2X3 320 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 DNAJB11Q9UBS4 358 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 NXF1Q9UBU9 619 aaKnown RBP6.55□□□□□ -1.36
CLIP4-205ENST00000415891 SERGEFQ9UGK8 458 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 STOML2Q9UJZ1 356 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 MAP3K2Q9Y2U5 619 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 CSADQ9Y600 493 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 NFS1Q9Y697 457 aa6.55□□□□□ -1.36
CLIP4-205ENST00000415891 LMTK3Q96Q04 1460 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 AFF2P51816 1311 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 EDDM13A0A1B0GTR0 161 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 FAM170BA6NMN3 283 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 SEPT4O43236 478 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 GPR32O75388 356 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 AKAP3O75969 853 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 PF4P02776 101 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 HMBSP08397 361 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 NUDT7P0C024 238 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 MBL2P11226 248 aaPredicted RBP6.54□□□□□ -1.36
CLIP4-205ENST00000415891 GRK4P32298 578 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 NR4A2P43354 598 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 PREPP48147 710 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 MLLT10P55197 1068 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 PER3P56645 1201 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 NCALDP61601 193 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 GPC5P78333 572 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 SIM1P81133 766 aaPredicted RBP6.54□□□□□ -1.36
CLIP4-205ENST00000415891 MBTD1Q05BQ5 628 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 GRIK2Q13002 908 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 ASAH1Q13510 395 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 ATP1A4Q13733 1029 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 OVOS1Q6IE37 1185 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 OR6B2Q6IFH4 312 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 RGS7BPQ6MZT1 257 aaPredicted RBP6.54□□□□□ -1.36
CLIP4-205ENST00000415891 FSTL4Q6MZW2 842 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 ANKRD26P1Q6NSI1 321 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 UGT3A1Q6NUS8 523 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 MOXD1Q6UVY6 613 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 LRRC70Q7Z2Q7 622 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 RAB44Q7Z6P3 723 aaPredicted RBP6.54□□□□□ -1.36
CLIP4-205ENST00000415891 ADGRD2Q7Z7M1 963 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 YRDCQ86U90 279 aaKnown RBP6.54□□□□□ -1.36
CLIP4-205ENST00000415891 SERINC5Q86VE9 423 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 ZDHHC13Q8IUH4 622 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 DHX40Q8IX18 779 aaKnown RBP6.54□□□□□ -1.36
CLIP4-205ENST00000415891 SLC35F3Q8IY50 421 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 WDTC1Q8N5D0 677 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 OR5T2Q8NGG2 359 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 NEK7Q8TDX7 302 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 SLC35F5Q8WV83 523 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 SSH1Q8WYL5 1049 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 SCLYQ96I15 445 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 WNK4Q96J92 1243 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 ZNF597Q96LX8 424 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 PFDN5Q99471 154 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 PRRT1Q99946 306 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 CLSTN3Q9BQT9 956 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 PTDSS2Q9BVG9 487 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 DUSP15Q9H1R2 295 aaPredicted RBP6.54□□□□□ -1.36
CLIP4-205ENST00000415891 SOX17Q9H6I2 414 aaPredicted RBP6.54□□□□□ -1.36
CLIP4-205ENST00000415891 EMC7Q9NPA0 242 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 PRMT7Q9NVM4 692 aaPredicted RBP6.54□□□□□ -1.36
CLIP4-205ENST00000415891 NDRG3Q9UGV2 375 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 RAPGEFL1Q9UHV5 662 aa6.54□□□□□ -1.36
CLIP4-205ENST00000415891 RWDD2AQ9UIY3 292 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms