RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 ERN2Q76MJ5 926 aaKnown RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 LONP2Q86WA8 852 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 GRAMD2AQ8IUY3 354 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 LGI4Q8N135 537 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 ZCCHC7Q8N3Z6 543 aaKnown RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 TRIM58Q8NG06 486 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 MOAP1Q96BY2 351 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 THOC1Q96FV9 657 aaKnown RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 GRAMD2BQ96HH9 432 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 CCDC17Q96LX7 622 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 RMDN2Q96LZ7 410 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 TMEM68Q96MH6 324 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 CFAP57Q96MR6 1250 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 ZNF570Q96NI8 536 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 MEIS3Q99687 375 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 SEMA3CQ99985 751 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 FAM234AQ9H0X4 552 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 RAD21L1Q9H4I0 556 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 PPP1R3EQ9H7J1 279 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 MMRN2Q9H8L6 949 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 TRPV5Q9NQA5 729 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 KLC4Q9NSK0 619 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 PRMT7Q9NVM4 692 aaPredicted RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 RAI14Q9P0K7 980 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 PTGFRNQ9P2B2 879 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 ZNF624Q9P2J8 865 aaPredicted RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 PCSK1NQ9UHG2 260 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 PIEZO1Q92508 2521 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 GRIN2DO15399 1336 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 UBXN8O00124 270 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 TO15178 435 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 SEMA7AO75326 666 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 MTX2O75431 263 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 PRAMEF12O95522 483 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 MT-ATP6P00846 226 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 CXCL10P02778 98 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 UBTFL1P0CB47 393 aaPredicted RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 NHLRC4P0CG21 123 aaPredicted RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 SRD5A1P18405 259 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 CYP2B6P20813 491 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 NR4A1P22736 598 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 DUSP1P28562 367 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 MAGEB1P43366 347 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 COMPP49747 757 aaPredicted RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 ASIC1P78348 528 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 NFYCQ13952 458 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 GCKRQ14397 625 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 RFTN1Q14699 578 aaPredicted RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 CCL14Q16627 93 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 SOWAHAQ2M3V2 549 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 BEAN1Q3B7T3 259 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 ENTPD8Q5MY95 495 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 TMEM63BQ5T3F8 832 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 ARTNQ5T4W7 220 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 DAB2IPQ5VWQ8 1189 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 SLC24A5Q71RS6 500 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 MEPCEQ7L2J0 689 aaKnown RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 DTX2Q86UW9 622 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 CDH26Q8IXH8 852 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 CDK20Q8IZL9 346 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 CCDC63Q8NA47 563 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 DNAAF4Q8WXU2 420 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 SAMD8Q96LT4 415 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 TRAF4Q9BUZ4 470 aaPredicted RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 S1PR5Q9H228 398 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 FZD8Q9H461 694 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 MLXIPLQ9NP71 852 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 NGBQ9NPG2 151 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 ACSS1Q9NUB1 689 aaPredicted RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 GRHL1Q9NZI5 618 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 OR14J1Q9UGF5 321 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 PTBP2Q9UKA9 531 aaKnown RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 ELOVL7A1L3X0 281 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 SH3D21A4FU49 640 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 MAGEA13PA6NCF6 341 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 EIF4E1BA6NMX2 242 aaKnown RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 MAGEB17A8MXT2 336 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 TRIM77I1YAP6 450 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 HAS3O00219 553 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 HYAL3O43820 417 aaPredicted RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 ZC3H11AO75152 810 aaKnown RBP eCLIP2.49□□□□□ -2.01
MCF2-204ENST00000414978 DUSP11O75319 330 aaKnown RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 BRI3O95415 125 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 DIRAS3O95661 229 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 CPN2P22792 545 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 ACP1P24666 158 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 DNAJB1P25685 340 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 EPHB2P29323 1055 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 CDAP32320 146 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 ACLYP53396 1101 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 PRKAA1Q13131 559 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 PRKD1Q15139 912 aaPredicted RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 TCTE1Q5JU00 501 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 PRAMEF8Q5VWM4 474 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 CDC42EP5Q6NZY7 148 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 DUS1LQ6P1R4 473 aaKnown RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 CEP85Q6P2H3 762 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 DET1Q7L5Y6 550 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 CIR1Q86X95 450 aaPredicted RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 C1orf210Q8IVY1 113 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms