RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 SNX33Q8WV41 574 aa16.86■□□□□ 0.29
PHRF1-202ENST00000413872 OR2M4Q96R27 311 aa16.86■□□□□ 0.29
PHRF1-202ENST00000413872 SATB2Q9UPW6 733 aa16.86■□□□□ 0.29
PHRF1-202ENST00000413872 M0QZQ0 153 aa16.86■□□□□ 0.29
PHRF1-202ENST00000413872 SIX3O95343 332 aaPredicted RBP16.86■□□□□ 0.29
PHRF1-202ENST00000413872 SIGLEC10Q96LC7 697 aa16.86■□□□□ 0.29
PHRF1-202ENST00000413872 JSRP1Q96MG2 331 aaPredicted RBP16.86■□□□□ 0.29
PHRF1-202ENST00000413872 FCRL4Q96PJ5 515 aa16.86■□□□□ 0.29
PHRF1-202ENST00000413872 TRIB3Q96RU7 358 aa16.86■□□□□ 0.29
PHRF1-202ENST00000413872 DNAJB9Q9UBS3 223 aa16.86■□□□□ 0.29
PHRF1-202ENST00000413872 RSL24D1Q9UHA3 163 aaKnown RBP16.86■□□□□ 0.29
PHRF1-202ENST00000413872 AQP12BA6NM10 295 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 CXorf49A8MYA2 514 aaPredicted RBP16.85■□□□□ 0.29
PHRF1-202ENST00000413872 PEX12O00623 359 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 SLC16A5O15375 505 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 DLX3O60479 287 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 WBP4O75554 376 aaKnown RBP16.85■□□□□ 0.29
PHRF1-202ENST00000413872 DSTNP60981 165 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 PTCHD3Q3KNS1 767 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 TNFAIP8L2Q6P589 184 aaPredicted RBP16.85■□□□□ 0.29
PHRF1-202ENST00000413872 AQP12AQ8IXF9 295 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 CLDN19Q8N6F1 224 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 CRYGNQ8WXF5 182 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 PRKAB1Q9Y478 270 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 FOXO6A8MYZ6 492 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 C9JVG2 144 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 KAT7O95251 611 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 PRAMEF12O95522 483 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 ANXA8P13928 327 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 OXTRP30559 389 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 PUS10Q3MIT2 529 aaKnown RBP16.85■□□□□ 0.29
PHRF1-202ENST00000413872 GALNT5Q7Z7M9 940 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 MAPK15Q8TD08 544 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 WDR92Q96MX6 357 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 LAMB4A4D0S4 1761 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 CDC7O00311 574 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 MANBAO00462 879 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 VEGFDO43915 354 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 HCN1O60741 890 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 NRLP54845 237 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 SCARB2Q14108 478 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 SLC8B1Q6J4K2 584 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 ADGRD2Q7Z7M1 963 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 C1GALT1C1Q96EU7 318 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 PDLIM7Q9NR12 457 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 PPM1HQ9ULR3 514 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 AK5Q9Y6K8 562 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 CLCN4P51793 760 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 HMGCS1Q01581 520 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.85■□□□□ 0.297e-12■■□□□ 12.7
PHRF1-202ENST00000413872 TOR1AIP1Q5JTV8 583 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 NAPRTQ6XQN6 538 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 OR4E2Q8NGC2 313 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 NEK7Q8TDX7 302 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 PNO1Q9NRX1 252 aaKnown RBP16.85■□□□□ 0.29
PHRF1-202ENST00000413872 GALPQ9UBC7 116 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 MAN2B2Q9Y2E5 1009 aa16.85■□□□□ 0.29
PHRF1-202ENST00000413872 BAZ2AQ9UIF9 1905 aaKnown RBP16.85■□□□□ 0.29
PHRF1-202ENST00000413872 AGPSO00116 658 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 PTGESO14684 152 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 PGM3O95394 542 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 SLC18A2Q05940 514 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 GOLGA7Q7Z5G4 137 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 RELL1Q8IUW5 271 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 OR52J3Q8NH60 311 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 GLYATL1Q969I3 302 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 ZNF358Q9NW07 568 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 CASKO14936 926 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 ANGPTL1O95841 491 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 KCNA5P22460 613 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 PSMA1P25786 263 aaKnown RBP16.84■□□□□ 0.29
PHRF1-202ENST00000413872 BTN3A2P78410 334 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 RBM20Q5T481 1227 aaKnown RBP16.84■□□□□ 0.29
PHRF1-202ENST00000413872 OR56A1Q8NGH5 318 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 UBASH3BQ8TF42 649 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 PMEPA1Q969W9 287 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 RANBP9Q96S59 729 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 SDHAF3Q9NRP4 125 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 FAM120CQ9NX05 1096 aaKnown RBP16.84■□□□□ 0.29
PHRF1-202ENST00000413872 ZDHHC7Q9NXF8 308 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 TESMINQ9Y4I5 508 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 SAP18O00422 153 aaKnown RBP16.84■□□□□ 0.29
PHRF1-202ENST00000413872 FADS2O95864 444 aaKnown RBP16.84■□□□□ 0.29
PHRF1-202ENST00000413872 FBXO43Q4G163 708 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 RTL10Q7L3V2 364 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 SIX5Q8N196 739 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 LINC00471Q8N535 108 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 SLC35A5Q9BS91 424 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 NSUN3Q9H649 340 aaKnown RBP16.84■□□□□ 0.29
PHRF1-202ENST00000413872 AKTIPQ9H8T0 292 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 Q9N2J8 555 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 DHRS7Q9Y394 339 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 ZNF823P16415 610 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 FAUP35544 74 aaKnown RBP16.84■□□□□ 0.29
PHRF1-202ENST00000413872 IL12RB1P42701 662 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 DHCR24Q15392 516 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 FAM214AQ32MH5 1076 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 ARHGAP40Q5TG30 622 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 DPY19L3Q6ZPD9 716 aa16.84■□□□□ 0.29
PHRF1-202ENST00000413872 PIGWQ7Z7B1 504 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms