RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 ENAMQ9NRM1 1142 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 ZDHHC3Q9NYG2 299 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 SEC14L3Q9UDX4 400 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 RSPH14Q9UHP6 348 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 ASF1AQ9Y294 204 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 KLHL20Q9Y2M5 609 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.14□□□□□ -0.95
RFFL-203ENST00000413582 INTS1Q8N201 2190 aaKnown RBP9.14□□□□□ -0.95
RFFL-203ENST00000413582 AKAP6Q13023 2319 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 A0A1W2PQ72 361 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 ISM1B1AKI9 464 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 LIN7AO14910 233 aaPredicted RBP9.13□□□□□ -0.95
RFFL-203ENST00000413582 PSTPIP1O43586 416 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 CST8O60676 142 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 SLC19A2O60779 497 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 GSTM1P09488 218 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 PRR35P0CG20 571 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 PRSS56P0CW18 603 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 COX6A1P12074 109 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 CTNNA2P26232 953 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 PKLRP30613 574 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 MC4RP32245 332 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 CDKN2BP42772 138 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 KIR3DL1P43629 444 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 OR1D4P47884 311 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 MARCKSL1P49006 195 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 GSTM4Q03013 218 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 KLC1Q07866 573 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 C3AR1Q16581 482 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 TAZQ16635 292 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 GPR33Q49SQ1 333 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 YOD1Q5VVQ6 348 aaPredicted RBP9.13□□□□□ -0.95
RFFL-203ENST00000413582 ZNF449Q6P9G9 518 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 RANBP10Q6VN20 620 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 BZW1Q7L1Q6 419 aaKnown RBP9.13□□□□□ -0.95
RFFL-203ENST00000413582 SERPINA9Q86WD7 417 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 KBTBD2Q8IY47 623 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 UBL4BQ8N7F7 174 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 CCDC110Q8TBZ0 833 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 BRIX1Q8TDN6 353 aaKnown RBP9.13□□□□□ -0.95
RFFL-203ENST00000413582 KRT35Q92764 455 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 HAS2Q92819 552 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 MTFMTQ96DP5 389 aaKnown RBP9.13□□□□□ -0.95
RFFL-203ENST00000413582 PBKQ96KB5 322 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 C19orf43Q9BQ61 176 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 APOL2Q9BQE5 337 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 GBA3Q9H227 469 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 PTGFRNQ9P2B2 879 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 POLG2Q9UHN1 485 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 TINAGQ9UJW2 476 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 SNX12Q9UMY4 172 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 TDRKHQ9Y2W6 561 aaKnown RBP9.13□□□□□ -0.95
RFFL-203ENST00000413582 MRPS2Q9Y399 296 aaKnown RBP9.13□□□□□ -0.95
RFFL-203ENST00000413582 PCDHA3Q9Y5H8 950 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 SAR1BQ9Y6B6 198 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 ABCA4P78363 2273 aa9.13□□□□□ -0.95
RFFL-203ENST00000413582 DNHD1Q96M86 4753 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 SCN2AQ99250 2005 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 FITM1A5D6W6 292 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 BHMG1C9JSJ3 638 aaPredicted RBP9.12□□□□□ -0.95
RFFL-203ENST00000413582 WISP2O76076 250 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 RASAL1O95294 804 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 MED26O95402 600 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 CRTAMO95727 393 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 AP2A1O95782 977 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 F10P00742 488 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 CRYABP02511 175 aaKnown RBP9.12□□□□□ -0.95
RFFL-203ENST00000413582 SERPINA7P05543 415 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 FDXRP22570 491 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 CTNNA1P35221 906 aaKnown RBP9.12□□□□□ -0.95
RFFL-203ENST00000413582 CARSP49589 748 aaKnown RBP9.12□□□□□ -0.95
RFFL-203ENST00000413582 GEMP55040 296 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 CASP6P55212 293 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 PMP22Q01453 160 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 RBPJQ06330 500 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 TFDP2Q14188 446 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 GRM7Q14831 915 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 DBN1Q16643 649 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 ATG9BQ674R7 924 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 CEP97Q8IW35 865 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 PIANPQ8IYJ0 282 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 PRSS58Q8IYP2 241 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 KATNAL2Q8IYT4 538 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 SIRT6Q8N6T7 355 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 LINC01555Q8NAE3 123 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 ACBD4Q8NC06 268 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 DNAJB8Q8NHS0 232 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 STT3BQ8TCJ2 826 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 ZNF592Q92610 1267 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 HAUS1Q96CS2 278 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 DNAJC1Q96KC8 554 aaKnown RBP9.12□□□□□ -0.95
RFFL-203ENST00000413582 MENTQ9BUN1 341 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 RNF32Q9H0A6 362 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.12□□□□□ -0.95
RFFL-203ENST00000413582 MCCC2Q9HCC0 563 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 RRAGDQ9NQL2 400 aaPredicted RBP9.12□□□□□ -0.95
RFFL-203ENST00000413582 DDX56Q9NY93 547 aaKnown RBP9.12□□□□□ -0.95
RFFL-203ENST00000413582 C3orf18Q9UK00 162 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 TRHDEQ9UKU6 1024 aa9.12□□□□□ -0.95
RFFL-203ENST00000413582 TTC7AQ9ULT0 858 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms