RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 ATP5C1P36542 298 aaKnown RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 ARL1P40616 181 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 PRKCIP41743 596 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 RPL34P49207 117 aaKnown RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 TMED10P49755 219 aaKnown RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 ATXN3P54252 364 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 CASP9P55211 416 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 WNT3P56703 355 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 WNT3AP56704 352 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 CTXN1P60606 82 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 DSTNP60981 165 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 ACTR1AP61163 376 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 PRAMEP78395 509 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 CDR2Q01850 454 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 MEF2AQ02078 507 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 CHRNEQ04844 493 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 KDSRQ06136 332 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 CDK18Q07002 472 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 MESP2Q0VG99 397 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 SF3A3Q12874 501 aaKnown RBP eCLIP4.47□□□□□ -1.694e-9■■□□□ 14.1
SF3B1-202ENST00000409915 GPS1Q13098 491 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 DNAJC3Q13217 504 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 MTM1Q13496 603 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 ATP1A4Q13733 1029 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 RUNX3Q13761 415 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 SNTB1Q13884 538 aaKnown RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 HNRNPDQ14103 355 aaKnown RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 CLCA4Q14CN2 919 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 PDK1Q15118 436 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 PON2Q15165 354 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 PDGFRLQ15198 375 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 TRADDQ15628 312 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 GAB4Q2WGN9 574 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 HFEQ30201 348 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 ITPRIPL2Q3MIP1 535 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 CDONQ4KMG0 1287 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 RAB6CQ53S08 254 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 ZNF569Q5MCW4 686 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 LY6G5CQ5SRR4 150 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 FAM102AQ5T9C2 384 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 OTUD1Q5VV17 481 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 SYPL2Q5VXT5 272 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 SPECC1LQ69YQ0 1117 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 FCRLBQ6BAA4 426 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 FCRL6Q6DN72 434 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 ETFRF1Q6IPR1 90 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 SLC25A24Q6NUK1 477 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 ANGPTL8Q6UXH0 198 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 B3GNT6Q6ZMB0 384 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 Q6ZS52 159 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 TPGS1Q6ZTW0 290 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 MSANTD1Q6ZTZ1 278 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 ACAD11Q709F0 780 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 DSG4Q86SJ6 1040 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 TAC4Q86UU9 113 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 CAND1Q86VP6 1230 aaKnown RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 SPATA24Q86W54 205 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 XYLT1Q86Y38 959 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 SFRP1Q8N474 314 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 FBXL6Q8N531 539 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 ALLCQ8N6M5 410 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 EMC1Q8N766 993 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 IL17RCQ8NAC3 791 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 FBXO15Q8NCQ5 510 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 TMEM35BQ8NCS4 154 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 TMEM52Q8NDY8 209 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 DDHD1Q8NEL9 900 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 PIWIL2Q8TC59 973 aaKnown RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 PHOSPHO1Q8TCT1 267 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 PYROXD1Q8WU10 500 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 INPP5DQ92835 1189 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 DNASE1L2Q92874 299 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 EME1Q96AY2 570 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 SAT2Q96F10 170 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 CHMP6Q96FZ7 201 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 CFAP36Q96G28 342 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 DGAT2Q96PD7 388 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 DHRS9Q9BPW9 319 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 ZPBPQ9BS86 351 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 HAUS8Q9BT25 410 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 PACSIN1Q9BY11 444 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 ACPTQ9BZG2 426 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 RAB6CQ9H0N0 254 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 DDX47Q9H0S4 455 aaKnown RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 LHX5Q9H2C1 402 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 SLC25A32Q9H2D1 315 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 LRMDAQ9H2I8 198 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 DCLRE1BQ9H816 532 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 ECT2Q9H8V3 914 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 SCPEP1Q9HB40 452 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 FBRSL1Q9HCM7 1045 aaKnown RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 ZDHHC4Q9NPG8 344 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 GDF3Q9NR23 364 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 MBNL1Q9NR56 388 aaKnown RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 SLC35D1Q9NTN3 355 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 DDX18Q9NVP1 670 aaKnown RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 THAP1Q9NVV9 213 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 ERVK13-1Q9NX77 482 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 TAS2R14Q9NYV8 317 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 PLK2Q9NYY3 685 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms