RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 CCDC115Q96NT0 180 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 TSSK3Q96PN8 268 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 HHIPQ96QV1 700 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 DYRK4Q9NR20 520 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 GEMIN8Q9NWZ8 242 aaKnown RBP19.52■□□□□ 0.72
USP39-204ENST00000409766 HCN2Q9UL51 889 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 CLGNO14967 610 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 C1orf105O95561 183 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 GGT1P19440 569 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 CYP4F3Q08477 520 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 CSTF3Q12996 717 aaKnown RBP19.52■□□□□ 0.72
USP39-204ENST00000409766 RUNDC3AQ59EK9 446 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 FOXB2Q5VYV0 432 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 NOXRED1Q6NXP6 359 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 XKR5Q6UX68 686 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 GPR149Q86SP6 731 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 TRAPPC5Q8IUR0 188 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 CHERPQ8IWX8 916 aaKnown RBP19.52■□□□□ 0.72
USP39-204ENST00000409766 CFAP206Q8IYR0 622 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 TBC1D21Q8IYX1 336 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 AADATQ8N5Z0 425 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 PACRGLQ8N7B6 248 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 FBXO15Q8NCQ5 510 aaPredicted RBP19.52■□□□□ 0.72
USP39-204ENST00000409766 DNAJB8Q8NHS0 232 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 SUSD6Q92537 303 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 APOLD1Q96LR9 279 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 TRIM39Q9HCM9 518 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 SERHLQ9NQF3 203 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 ATXN10Q9UBB4 475 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.52■□□□□ 0.72
USP39-204ENST00000409766 PPT2Q9UMR5 302 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 MAN2B2Q9Y2E5 1009 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 SAC3D1A6NKF1 404 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 H0YIV9 168 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 S100A3P33764 101 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 P2RY2P41231 377 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 FCHO2Q0JRZ9 810 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 SHHQ15465 462 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 GRHL2Q6ISB3 625 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 ZNF547Q8IVP9 402 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 EGLN2Q96KS0 407 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 SH3GL1Q99961 368 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 THUMPD3Q9BV44 507 aaKnown RBP19.51■□□□□ 0.71
USP39-204ENST00000409766 PAIP1Q9H074 479 aaKnown RBP19.51■□□□□ 0.71
USP39-204ENST00000409766 KCNH6Q9H252 994 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 ZDHHC4Q9NPG8 344 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 PRSS16Q9NQE7 514 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 SLC6A13Q9NSD5 602 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 SPATA6Q9NWH7 488 aaPredicted RBP19.51■□□□□ 0.71
USP39-204ENST00000409766 THAP10Q9P2Z0 257 aaPredicted RBP19.51■□□□□ 0.71
USP39-204ENST00000409766 ARHGAP10A1A4S6 786 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 MAP3K13O43283 966 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 ERN1O75460 977 aaKnown RBP19.51■□□□□ 0.71
USP39-204ENST00000409766 GJA4P35212 333 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 HNF4AP41235 474 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 CLCN2P51788 898 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 TXNL4AP83876 142 aaKnown RBP19.51■□□□□ 0.71
USP39-204ENST00000409766 RUNX3Q13761 415 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 LRIF1Q5T3J3 769 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 DNAJC14Q6Y2X3 702 aaPredicted RBP19.51■□□□□ 0.71
USP39-204ENST00000409766 DSG4Q86SJ6 1040 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 ZNF548Q8NEK5 533 aaPredicted RBP19.51■□□□□ 0.71
USP39-204ENST00000409766 OR2T12Q8NG77 320 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 OR10A6Q8NH74 314 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 CSGALNACT1Q8TDX6 532 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 LINC00615Q96LM1 132 aaPredicted RBP19.51■□□□□ 0.71
USP39-204ENST00000409766 HDAC8Q9BY41 377 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 DZANK1Q9NVP4 752 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 PCDHB14Q9Y5E9 798 aa19.51■□□□□ 0.71
USP39-204ENST00000409766 DOCK8Q8NF50 2099 aa19.5■□□□□ 0.71
USP39-204ENST00000409766 MYBPC1Q00872 1141 aa19.5■□□□□ 0.71
USP39-204ENST00000409766 GTDC1Q4AE62 458 aa19.5■□□□□ 0.71
USP39-204ENST00000409766 NHSL2Q5HYW2 709 aa19.5■□□□□ 0.71
USP39-204ENST00000409766 CPA6Q8N4T0 437 aa19.5■□□□□ 0.71
USP39-204ENST00000409766 CBR4Q8N4T8 237 aa19.5■□□□□ 0.71
USP39-204ENST00000409766 ZNF514Q96K75 400 aaPredicted RBP19.5■□□□□ 0.71
USP39-204ENST00000409766 MTERF1Q99551 399 aaKnown RBP19.5■□□□□ 0.71
USP39-204ENST00000409766 LMAN2LQ9H0V9 348 aa19.5■□□□□ 0.71
USP39-204ENST00000409766 GORASP2Q9H8Y8 452 aa19.5■□□□□ 0.71
USP39-204ENST00000409766 VPS29Q9UBQ0 182 aa19.5■□□□□ 0.71
USP39-204ENST00000409766 A0A096LPI6 279 aa19.49■□□□□ 0.71
USP39-204ENST00000409766 C17orf113A0A1B0GUU1 675 aa19.49■□□□□ 0.71
USP39-204ENST00000409766 C1QTNF3-AMACRE9PGA6 284 aa19.49■□□□□ 0.71
USP39-204ENST00000409766 EPHX1P07099 455 aa19.49■□□□□ 0.71
USP39-204ENST00000409766 ANXA6P08133 673 aa19.49■□□□□ 0.71
USP39-204ENST00000409766 HOXB9P17482 250 aaPredicted RBP19.49■□□□□ 0.71
USP39-204ENST00000409766 GRIA2P42262 883 aa19.49■□□□□ 0.71
USP39-204ENST00000409766 E2F2Q14209 437 aa19.49■□□□□ 0.71
USP39-204ENST00000409766 ATP6AP1Q15904 470 aa19.49■□□□□ 0.71
USP39-204ENST00000409766 MFSD2AQ8NA29 543 aa19.49■□□□□ 0.71
USP39-204ENST00000409766 ZNF480Q8WV37 535 aa19.49■□□□□ 0.71
USP39-204ENST00000409766 ERLEC1Q96DZ1 483 aa19.49■□□□□ 0.71
USP39-204ENST00000409766 CHFRQ96EP1 664 aa19.49■□□□□ 0.71
USP39-204ENST00000409766 GBP5Q96PP8 586 aa19.49■□□□□ 0.71
USP39-204ENST00000409766 SEPHS2Q99611 448 aa19.49■□□□□ 0.71
USP39-204ENST00000409766 OSBPL6Q9BZF3 934 aa19.49■□□□□ 0.71
USP39-204ENST00000409766 FAM192AQ9GZU8 254 aa19.49■□□□□ 0.71
USP39-204ENST00000409766 IGFLR1Q9H665 355 aa19.49■□□□□ 0.71
USP39-204ENST00000409766 GPR34Q9UPC5 381 aa19.49■□□□□ 0.71
USP39-204ENST00000409766 AP3M1Q9Y2T2 418 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms