RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 TAGLN3Q9UI15 199 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 KCNE1BA0A087WTH5 132 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 WFS1O76024 890 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 KRT6AP02538 564 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 KRT6BP04259 564 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 JUPP14923 745 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 JUNDP17535 347 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 AOC1P19801 751 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 CALB2P22676 271 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 PIK3R1P27986 724 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 KRT6CP48668 564 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 RACK1P63244 317 aaKnown RBP12.04□□□□□ -0.48
CHMP3-204ENST00000409727 IMPG1Q17R60 797 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 ATP6AP1LQ52LC2 224 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 PRRT3Q5FWE3 981 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 FAM91A1Q658Y4 838 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 Q6ZSR9 355 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 CHSY3Q70JA7 882 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 KLHDC8AQ8IYD2 350 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 RAB42Q8N4Z0 105 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 MFSD2AQ8NA29 543 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 LINC01555Q8NAE3 123 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 FNDC5Q8NAU1 212 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 PATE1Q8WXA2 126 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 KLHL29Q96CT2 875 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 CXorf40BQ96DE9 158 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 SLC45A3Q96JT2 553 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 MIPEPQ99797 713 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 IER2Q9BTL4 223 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 SLC29A3Q9BZD2 475 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 PCED1AQ9H1Q7 454 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 ZNF385DQ9H6B1 395 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 ACTR5Q9H9F9 607 aaPredicted RBP12.04□□□□□ -0.48
CHMP3-204ENST00000409727 GPR27Q9NS67 375 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 TAAR2Q9P1P5 351 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 ZNF624Q9P2J8 865 aaPredicted RBP12.04□□□□□ -0.48
CHMP3-204ENST00000409727 APOBEC3BQ9UH17 382 aaKnown RBP12.04□□□□□ -0.48
CHMP3-204ENST00000409727 SNX6Q9UNH7 406 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 MUC3AQ02505 3323 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 LRP4O75096 1905 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 EML5Q05BV3 1969 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 TLR4O00206 839 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 LAMTOR5O43504 91 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 VPS4BO75351 444 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 PCNAP12004 261 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 CDH1P12830 882 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 F3P13726 295 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 CSNK1EP49674 416 aaKnown RBP12.04□□□□□ -0.48
CHMP3-204ENST00000409727 DIO3P55073 304 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 MXRA7P84157 204 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 ACTN3Q08043 901 aaPredicted RBP12.04□□□□□ -0.48
CHMP3-204ENST00000409727 NAA25Q14CX7 972 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 TBCCQ15814 346 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 CYP2A13Q16696 494 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 GGTA1PQ4G0N0 100 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 LIPJQ5W064 366 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 ADNP2Q6IQ32 1131 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 ABRAXAS1Q6UWZ7 409 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 RINLQ6ZS11 566 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 CPSF7Q8N684 471 aaKnown RBP12.04□□□□□ -0.48
CHMP3-204ENST00000409727 SLC5A11Q8WWX8 675 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 MTERF1Q99551 399 aaKnown RBP12.04□□□□□ -0.48
CHMP3-204ENST00000409727 GSDMCQ9BYG8 508 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 ACPTQ9BZG2 426 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 MVB12BQ9H7P6 319 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 ICKQ9UPZ9 632 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 HEBP2Q9Y5Z4 205 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 COLEC10Q9Y6Z7 277 aa12.04□□□□□ -0.48
CHMP3-204ENST00000409727 A0A1W2PR77 199 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 LSM1O15116 133 aaKnown RBP12.03□□□□□ -0.48
CHMP3-204ENST00000409727 RGS14O43566 566 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 SH3BGRLO75368 114 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 ATP5HO75947 161 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 ERGP11308 486 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 CCND1P24385 295 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 HSD17B2P37059 387 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 MAGEA9P43362 315 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 RAB28P51157 221 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 BLKP51451 505 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 STX1BP61266 288 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 CSTF1Q05048 431 aaKnown RBP12.03□□□□□ -0.48
CHMP3-204ENST00000409727 SLBPQ14493 270 aaKnown RBP eCLIP12.03□□□□□ -0.48
CHMP3-204ENST00000409727 SQLEQ14534 574 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 ARHGAP19Q14CB8 494 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 RPS6KA2Q15349 733 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 AP5B1Q2VPB7 878 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 C6orf136Q5SQH8 315 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 FRG2Q64ET8 278 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 GRHL2Q6ISB3 625 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 PAOXQ6QHF9 649 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 SLCO4C1Q6ZQN7 724 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 GK5Q6ZS86 529 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 SNX32Q86XE0 403 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 TRIM48Q8IWZ4 208 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 FAM20CQ8IXL6 584 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 OR4E2Q8NGC2 313 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 OR9I1Q8NGQ6 314 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 FBXO27Q8NI29 283 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 GPBAR1Q8TDU6 330 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 SMPDL3AQ92484 453 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms