RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 KLHL8Q9P2G9 620 aaPredicted RBP12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 ERRFI1Q9UJM3 462 aaPredicted RBP12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 RARRES3Q9UL19 164 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 RGSL1A5PLK6 1076 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 WIPF3A6NGB9 483 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 KMOO15229 486 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 GLRA3O75311 464 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 HAUS5O94927 633 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 POLBP06746 335 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 CES1P23141 567 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 CCND1P24385 295 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 CCNCP24863 283 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 GTF2A1P52655 376 aaPredicted RBP12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 RPL26P61254 145 aaKnown RBP12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 OCRLQ01968 901 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 MROH9Q5TGP6 573 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 KCTD11Q693B1 232 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 PID1Q7Z2X4 250 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 MTDHQ86UE4 582 aaKnown RBP12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 LRRTM4Q86VH4 590 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 LRRC49Q8IUZ0 686 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 KLHDC8BQ8IXV7 354 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 RBMXL3Q8N7X1 1067 aaKnown RBP12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 SLC38A9Q8NBW4 561 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 ARMC2Q8NEN0 867 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 FDCSPQ8NFU4 85 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 ADAMTS17Q8TE56 1095 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 THAP4Q8WY91 577 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 GLYATL1Q969I3 302 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 UTP4Q969X6 686 aaKnown RBP12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 ISL2Q96A47 359 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 ZDHHC12Q96GR4 267 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 GORASP1Q9BQQ3 440 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 NUDT9Q9BW91 350 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 GPR87Q9BY21 358 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 RAB33BQ9H082 229 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 PDE7BQ9NP56 450 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 POT1Q9NUX5 634 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 HEY2Q9UBP5 337 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 HAO1Q9UJM8 370 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 DCTN4Q9UJW0 460 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 FARSAQ9Y285 508 aaKnown RBP12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 A0A0G2JND7 137 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 AP3B1O00203 1094 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 PSMD3O43242 534 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 SNNO75324 88 aaPredicted RBP12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 CEACAM4O75871 244 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 DDAH2O95865 285 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 LDLRP01130 860 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 SLC4A1P02730 911 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 EZRP15311 586 aaKnown RBP12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 GP5P40197 560 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 TMPRSS15P98073 1019 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 BST1Q10588 318 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 CHI3L2Q15782 390 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 GRTP1Q5TC63 336 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 MAMDC2Q7Z304 686 aaPredicted RBP12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 SYVN1Q86TM6 617 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 NUDCD3Q8IVD9 361 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 TRAM1L1Q8N609 369 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 CNTD1Q8N815 330 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 CXorf40BQ96DE9 158 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 PTCD3Q96EY7 689 aaKnown RBP12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 TSGA13Q96PP4 275 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 TRIB3Q96RU7 358 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 CPNE1Q99829 537 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 SIKE1Q9BRV8 207 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 TIMM29Q9BSF4 260 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 TACO1Q9BSH4 297 aaKnown RBP12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 ZFYVE1Q9HBF4 777 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 BFARQ9NZS9 450 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 CSMD1Q96PZ7 3565 aa12.33□□□□□ -0.44
CHRNA1-205ENST00000409542 SPTBP11277 2137 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 DOPEY1Q5JWR5 2465 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 MAGEB16A2A368 324 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 A6NL46 340 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 F5H423 210 aaPredicted RBP12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 KCNK1O00180 336 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 AURKAO14965 403 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 CBX6O95503 412 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 JCHAINP01591 159 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 BPIP17213 487 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 LPOP22079 712 aaPredicted RBP12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 CA5AP35218 305 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 MAGEA12P43365 314 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 NPY2RP49146 381 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 ITGA1P56199 1179 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 RPS15P62841 145 aaKnown RBP12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 CRADDP78560 199 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 ZBTB17Q13105 803 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 GPR19Q15760 415 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 CHRNA6Q15825 494 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 AGAP9Q5VTM2 703 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 SLC6A19Q695T7 634 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 TIGD7Q6NT04 549 aaPredicted RBP12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 WASH2PQ6VEQ5 465 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 MR1Q95460 341 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 CERS2Q96G23 380 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 PPM1MQ96MI6 270 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 FCRL4Q96PJ5 515 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms