RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 CSTF3Q12996 717 aaKnown RBP20.07■□□□□ 0.8
USP39-203ENST00000409470 STARD3Q14849 445 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 CAPN13Q6MZZ7 669 aaPredicted RBP20.07■□□□□ 0.8
USP39-203ENST00000409470 RALGPS2Q86X27 583 aaPredicted RBP20.07■□□□□ 0.8
USP39-203ENST00000409470 PTRH1Q86Y79 214 aaKnown RBP20.07■□□□□ 0.8
USP39-203ENST00000409470 GTF2H4Q92759 462 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 MTERF1Q99551 399 aaKnown RBP20.07■□□□□ 0.8
USP39-203ENST00000409470 DPEP2Q9H4A9 486 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 SGK2Q9HBY8 427 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 NPIPB8E9PQR5 432 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 TXNDC9O14530 226 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 MTHFD1P11586 935 aaKnown RBP20.07■□□□□ 0.8
USP39-203ENST00000409470 NCK1P16333 377 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 AMD1P17707 334 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 PSMA4P25789 261 aaKnown RBP20.07■□□□□ 0.8
USP39-203ENST00000409470 CDK3Q00526 305 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 WSCD2Q2TBF2 565 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 AASDHQ4L235 1098 aaPredicted RBP20.07■□□□□ 0.8
USP39-203ENST00000409470 XKR5Q6UX68 686 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 OR9A1PQ8NGU1 263 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 WDR20Q8TBZ3 569 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 CSGALNACT1Q8TDX6 532 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 EME1Q96AY2 570 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 VCXQ9H320 206 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.07■□□□□ 0.8
USP39-203ENST00000409470 SERGEFQ9UGK8 458 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 H0YIV9 168 aa20.06■□□□□ 0.8
USP39-203ENST00000409470 SDC1P18827 310 aa20.06■□□□□ 0.8
USP39-203ENST00000409470 HTR1EP28566 365 aa20.06■□□□□ 0.8
USP39-203ENST00000409470 TNFRSF4P43489 277 aa20.06■□□□□ 0.8
USP39-203ENST00000409470 TBPL1P62380 186 aa20.06■□□□□ 0.8
USP39-203ENST00000409470 TBCELQ5QJ74 424 aa20.06■□□□□ 0.8
USP39-203ENST00000409470 C11orf96Q7Z7L8 435 aa20.06■□□□□ 0.8
USP39-203ENST00000409470 AMZ2Q86W34 360 aa20.06■□□□□ 0.8
USP39-203ENST00000409470 GANCQ8TET4 914 aa20.06■□□□□ 0.8
USP39-203ENST00000409470 BTBD9Q96Q07 612 aa20.06■□□□□ 0.8
USP39-203ENST00000409470 NR1H4Q96RI1 486 aaPredicted RBP20.06■□□□□ 0.8
USP39-203ENST00000409470 CCM2LQ9NUG4 571 aaPredicted RBP20.06■□□□□ 0.8
USP39-203ENST00000409470 ARMC1Q9NVT9 282 aa20.06■□□□□ 0.8
USP39-203ENST00000409470 GPRC5BQ9NZH0 403 aa20.06■□□□□ 0.8
USP39-203ENST00000409470 VPS29Q9UBQ0 182 aa20.06■□□□□ 0.8
USP39-203ENST00000409470 USP22Q9UPT9 525 aa20.06■□□□□ 0.8
USP39-203ENST00000409470 PCYT1BQ9Y5K3 369 aaPredicted RBP20.06■□□□□ 0.8
USP39-203ENST00000409470 K7EQS6 105 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 AKAP10O43572 662 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 DFNA5O60443 496 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 TIPRLO75663 272 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 IL10P22301 178 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 TACR1P25103 407 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 S100A3P33764 101 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 MED21Q13503 144 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 SELPLGQ14242 412 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 IRAK1BP1Q5VVH5 260 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 ZNF776Q68DI1 518 aaPredicted RBP20.05■□□□□ 0.8
USP39-203ENST00000409470 NOXRED1Q6NXP6 359 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 FAM83HQ6ZRV2 1179 aaPredicted RBP20.05■□□□□ 0.8
USP39-203ENST00000409470 TMPRSS11BQ86T26 416 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 TICAM1Q8IUC6 712 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 GOLM1Q8NBJ4 401 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 OR8J3Q8NGG0 315 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 NEIL2Q969S2 332 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 VAPAQ9P0L0 249 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 DYRK1BQ9Y463 629 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 PCDHGA11Q9Y5H2 935 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 TRPM6Q9BX84 2022 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 PCNAP12004 261 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 DNAJC14Q6Y2X3 702 aaPredicted RBP20.05■□□□□ 0.8
USP39-203ENST00000409470 MTSS1LQ765P7 747 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 AMIGO2Q86SJ2 522 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 LRRTM4Q86VH4 590 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 GALNT4Q8N4A0 578 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 SPDYE1Q8NFV5 336 aaPredicted RBP20.05■□□□□ 0.8
USP39-203ENST00000409470 UHRF1Q96T88 793 aaPredicted RBP20.05■□□□□ 0.8
USP39-203ENST00000409470 GDF15Q99988 308 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 LGR4Q9BXB1 951 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 EBPLQ9BY08 206 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 ASF1AQ9Y294 204 aa20.05■□□□□ 0.8
USP39-203ENST00000409470 MAGEA13PA6NCF6 341 aa20.04■□□□□ 0.8
USP39-203ENST00000409470 VGLL3A8MV65 326 aa20.04■□□□□ 0.8
USP39-203ENST00000409470 LRATO95237 230 aa20.04■□□□□ 0.8
USP39-203ENST00000409470 CAPNS1P04632 268 aa20.04■□□□□ 0.8
USP39-203ENST00000409470 UBTFL6P0CB48 400 aaPredicted RBP20.04■□□□□ 0.8
USP39-203ENST00000409470 ACPPP15309 386 aa20.04■□□□□ 0.8
USP39-203ENST00000409470 PCSK2P16519 638 aa20.04■□□□□ 0.8
USP39-203ENST00000409470 ACADLP28330 430 aa20.04■□□□□ 0.8
USP39-203ENST00000409470 KIR2DL1P43626 348 aaPredicted RBP20.04■□□□□ 0.8
USP39-203ENST00000409470 OR4D2P58180 307 aa20.04■□□□□ 0.8
USP39-203ENST00000409470 FOLH1Q04609 750 aa20.04■□□□□ 0.8
USP39-203ENST00000409470 PCDH1Q08174 1060 aa20.04■□□□□ 0.8
USP39-203ENST00000409470 CYP51A1Q16850 503 aa20.04■□□□□ 0.8
USP39-203ENST00000409470 PGS1Q32NB8 556 aa20.04■□□□□ 0.8
USP39-203ENST00000409470 C2orf27AQ580R0 203 aa20.04■□□□□ 0.8
USP39-203ENST00000409470 TMEM154Q6P9G4 183 aa20.04■□□□□ 0.8
USP39-203ENST00000409470 PROSER1Q86XN7 944 aa20.04■□□□□ 0.8
USP39-203ENST00000409470 THUMPD3Q9BV44 507 aaKnown RBP20.04■□□□□ 0.8
USP39-203ENST00000409470 ZDHHC5Q9C0B5 715 aa20.04■□□□□ 0.8
USP39-203ENST00000409470 ITM2CQ9NQX7 267 aa20.04■□□□□ 0.8
USP39-203ENST00000409470 CLDND1Q9NY35 253 aa20.04■□□□□ 0.8
USP39-203ENST00000409470 MTHFRP42898 656 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 UNC5DQ6UXZ4 953 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms