RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 RPA3P35244 121 aaPredicted RBP19.56■□□□□ 0.72
PTCD3-202ENST00000409326 MAGEA12P43365 314 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 TUBB3Q13509 450 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 IL11RAQ14626 422 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 TAF1BQ53T94 588 aaPredicted RBP19.56■□□□□ 0.72
PTCD3-202ENST00000409326 ADGRD1Q6QNK2 874 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 CEACAM20Q6UY09 585 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 FAM20CQ8IXL6 584 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 SPATA6LQ8N4H0 392 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 KDF1Q8NAX2 398 aaPredicted RBP19.56■□□□□ 0.72
PTCD3-202ENST00000409326 OR2L3Q8NG85 312 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 SNIP1Q8TAD8 396 aaKnown RBP19.56■□□□□ 0.72
PTCD3-202ENST00000409326 TCTN2Q96GX1 697 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 ZPBPQ9BS86 351 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 UNKQ9C0B0 810 aaKnown RBP19.56■□□□□ 0.72
PTCD3-202ENST00000409326 INTS7Q9NVH2 962 aaKnown RBP19.56■□□□□ 0.72
PTCD3-202ENST00000409326 FOXJ2Q9P0K8 574 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 ACSL6Q9UKU0 697 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 RAB21Q9UL25 225 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 ACOT9Q9Y305 439 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 B3GALT1Q9Y5Z6 326 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 MDC1Q14676 2089 aaKnown RBP19.56■□□□□ 0.72
PTCD3-202ENST00000409326 DMXL2Q8TDJ6 3036 aa19.56■□□□□ 0.72
PTCD3-202ENST00000409326 A0A096LPK6 155 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 TLX3O43711 291 aaPredicted RBP19.55■□□□□ 0.72
PTCD3-202ENST00000409326 KRT37O76014 449 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 GUCA1CO95843 209 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 TUBBP07437 444 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 LTA4HP09960 611 aaKnown RBP19.55■□□□□ 0.72
PTCD3-202ENST00000409326 MSL3P1P0C860 447 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 FGF5P12034 268 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 MAGP20916 626 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 GMPRP36959 345 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 TBPL1P62380 186 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 CDKL1Q00532 357 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 DLG1Q12959 904 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 TSTA3Q13630 321 aaPredicted RBP19.55■□□□□ 0.72
PTCD3-202ENST00000409326 ZIC1Q15915 447 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 KIAA1614Q5VZ46 1190 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 AGTRAPQ6RW13 159 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 FRA10AC1Q70Z53 315 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 PROSER1Q86XN7 944 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 ATL1Q8WXF7 558 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 FGF11Q92914 225 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 CAVIN3Q969G5 261 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 FBXL8Q96CD0 374 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 CNTNAP3BQ96NU0 1288 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 MIPEPQ99797 713 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 CTRCQ99895 268 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 CCDC77Q9BR77 488 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 CNTNAP3Q9BZ76 1288 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 CCDC177Q9NQR7 707 aaPredicted RBP19.55■□□□□ 0.72
PTCD3-202ENST00000409326 FGF21Q9NSA1 209 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 UTP6Q9NYH9 597 aaKnown RBP19.55■□□□□ 0.72
PTCD3-202ENST00000409326 TAC3Q9UHF0 121 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 TLK1Q9UKI8 766 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 KLK4Q9Y5K2 254 aa19.55■□□□□ 0.72
PTCD3-202ENST00000409326 TRIM49D1C9J1S8 452 aa19.54■□□□□ 0.72
PTCD3-202ENST00000409326 SNRPAP09012 282 aaKnown RBP19.54■□□□□ 0.72
PTCD3-202ENST00000409326 CD82P27701 267 aa19.54■□□□□ 0.72
PTCD3-202ENST00000409326 CMPK1P30085 196 aa19.54■□□□□ 0.72
PTCD3-202ENST00000409326 HSD17B3P37058 310 aa19.54■□□□□ 0.72
PTCD3-202ENST00000409326 PCBP4P57723 403 aaKnown RBP19.54■□□□□ 0.72
PTCD3-202ENST00000409326 NAA25Q14CX7 972 aa19.54■□□□□ 0.72
PTCD3-202ENST00000409326 LGSNQ5TDP6 509 aa19.54■□□□□ 0.72
PTCD3-202ENST00000409326 CDHR3Q6ZTQ4 885 aa19.54■□□□□ 0.72
PTCD3-202ENST00000409326 BPHLQ86WA6 291 aaPredicted RBP19.54■□□□□ 0.72
PTCD3-202ENST00000409326 CENPLQ8N0S6 344 aaPredicted RBP19.54■□□□□ 0.72
PTCD3-202ENST00000409326 CNPY4Q8N129 248 aa19.54■□□□□ 0.72
PTCD3-202ENST00000409326 KIAA1191Q96A73 305 aa19.54■□□□□ 0.72
PTCD3-202ENST00000409326 PTERQ96BW5 349 aa19.54■□□□□ 0.72
PTCD3-202ENST00000409326 ZNF501Q96CX3 271 aaPredicted RBP19.54■□□□□ 0.72
PTCD3-202ENST00000409326 MTBPQ96DY7 904 aa19.54■□□□□ 0.72
PTCD3-202ENST00000409326 ACAT2Q9BWD1 397 aa19.54■□□□□ 0.72
PTCD3-202ENST00000409326 ATG10Q9H0Y0 220 aa19.54■□□□□ 0.72
PTCD3-202ENST00000409326 FANCEQ9HB96 536 aa19.54■□□□□ 0.72
PTCD3-202ENST00000409326 NMRAL1Q9HBL8 299 aa19.54■□□□□ 0.72
PTCD3-202ENST00000409326 FAM60AQ9NP50 221 aa19.54■□□□□ 0.72
PTCD3-202ENST00000409326 IGSF5Q9NSI5 407 aa19.54■□□□□ 0.72
PTCD3-202ENST00000409326 PSMC3IPQ9P2W1 217 aaPredicted RBP19.54■□□□□ 0.72
PTCD3-202ENST00000409326 RARRES3Q9UL19 164 aa19.54■□□□□ 0.72
PTCD3-202ENST00000409326 URB1O60287 2271 aaKnown RBP19.53■□□□□ 0.72
PTCD3-202ENST00000409326 TARM1B6A8C7 271 aa19.53■□□□□ 0.72
PTCD3-202ENST00000409326 CCNDBP1O95273 360 aa19.53■□□□□ 0.72
PTCD3-202ENST00000409326 SHBGP04278 402 aa19.53■□□□□ 0.72
PTCD3-202ENST00000409326 ANXA5P08758 320 aa19.53■□□□□ 0.72
PTCD3-202ENST00000409326 CCND1P24385 295 aa19.53■□□□□ 0.72
PTCD3-202ENST00000409326 GRIA3P42263 894 aa19.53■□□□□ 0.72
PTCD3-202ENST00000409326 IRF9Q00978 393 aa19.53■□□□□ 0.72
PTCD3-202ENST00000409326 TGFBIQ15582 683 aa19.53■□□□□ 0.72
PTCD3-202ENST00000409326 OR4D1Q15615 310 aa19.53■□□□□ 0.72
PTCD3-202ENST00000409326 GPR19Q15760 415 aa19.53■□□□□ 0.72
PTCD3-202ENST00000409326 ZXDCQ2QGD7 858 aaPredicted RBP19.53■□□□□ 0.72
PTCD3-202ENST00000409326 PRAMEF13Q5VWM6 474 aa19.53■□□□□ 0.72
PTCD3-202ENST00000409326 ICE2Q659A1 982 aa19.53■□□□□ 0.72
PTCD3-202ENST00000409326 FIGLAQ6QHK4 219 aa19.53■□□□□ 0.72
PTCD3-202ENST00000409326 PPP1R3BQ86XI6 285 aa19.53■□□□□ 0.72
PTCD3-202ENST00000409326 OR8K5Q8NH50 307 aa19.53■□□□□ 0.72
PTCD3-202ENST00000409326 OR56A3Q8NH54 315 aa19.53■□□□□ 0.72
PTCD3-202ENST00000409326 KCTD4Q8WVF5 259 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms