RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 ACVR1Q04771 509 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 SF1Q15637 639 aaKnown RBP8.79□□□□□ -1
NIF3L1-203ENST00000409129 FASTKD1Q53R41 847 aaKnown RBP8.79□□□□□ -1
NIF3L1-203ENST00000409129 ZC3H12BQ5HYM0 836 aaKnown RBP8.79□□□□□ -1
NIF3L1-203ENST00000409129 TCTE1Q5JU00 501 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 TSTD2Q5T7W7 516 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 YOD1Q5VVQ6 348 aaPredicted RBP8.79□□□□□ -1
NIF3L1-203ENST00000409129 PRAMEF13Q5VWM6 474 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 FCRL6Q6DN72 434 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 FIGLAQ6QHK4 219 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 RAD9BQ6WBX8 426 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 PPP1R21Q6ZMI0 780 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 CUZD1Q86UP6 607 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 SYCE1Q8N0S2 351 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 C2orf73Q8N5S3 287 aaPredicted RBP8.79□□□□□ -1
NIF3L1-203ENST00000409129 LMNTD1Q8N9Z9 388 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 ACRBPQ8NEB7 543 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 OR6P1Q8NGX9 317 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 OR2L8Q8NGY9 312 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 CFAP61Q8NHU2 1237 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 ZNF778Q96MU6 729 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 TSSK1BQ9BXA7 367 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 SLC26A1Q9H2B4 701 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 WDR54Q9H977 334 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 ETNK1Q9HBU6 452 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 SLC6A20Q9NP91 592 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 ENAMQ9NRM1 1142 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 AGPAT4Q9NRZ5 378 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 INTS7Q9NVH2 962 aaKnown RBP8.79□□□□□ -1
NIF3L1-203ENST00000409129 CIDEBQ9UHD4 219 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 CDC23Q9UJX2 597 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 FBXL4Q9UKA2 621 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 PACSIN2Q9UNF0 486 aaPredicted RBP8.79□□□□□ -1
NIF3L1-203ENST00000409129 NTNG1Q9Y2I2 539 aa8.79□□□□□ -1
NIF3L1-203ENST00000409129 ZNF469Q96JG9 3925 aaPredicted RBP8.78□□□□□ -1
NIF3L1-203ENST00000409129 ABCA2Q9BZC7 2435 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 IQCF5A8MTL0 148 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 TARM1B6A8C7 271 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 SOCS6O14544 535 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 RASGRF2O14827 1237 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 DSCR3O14972 297 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 SLCO2B1O94956 709 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 FTCDO95954 541 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 APOA4P06727 396 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 AOAHP28039 575 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 FDFT1P37268 417 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 GRIA1P42261 906 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 GRIA3P42263 894 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 GRB7Q14451 532 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 SEMA3AQ14563 771 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 GRM7Q14831 915 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 NKG7Q16617 165 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 HIF1AQ16665 826 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 ZXDCQ2QGD7 858 aaPredicted RBP8.78□□□□□ -1
NIF3L1-203ENST00000409129 AGAP7PQ5VUJ5 663 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 KIRREL2Q6UWL6 708 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 IGFL2Q6UWQ7 119 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 UNC5DQ6UXZ4 953 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 ZNF534Q76KX8 674 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 NLRP9Q7RTR0 991 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 KIAA1328Q86T90 577 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 TAX1BP1Q86VP1 789 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 DCUN1D3Q8IWE4 304 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 MMP21Q8N119 569 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 SLC34A3Q8N130 599 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 ST6GALNAC3Q8NDV1 305 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 DNAJB14Q8TBM8 379 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 LKAAEAR1Q8TD35 194 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 PPP4R1Q8TF05 950 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 UBE2Q2Q8WVN8 375 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.78□□□□□ -1
NIF3L1-203ENST00000409129 ZUFSPQ96AP4 578 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 MRFAP1L1Q96HT8 127 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 ZNF285Q96NJ3 590 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 AGAP4Q96P64 663 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 IL17FQ96PD4 163 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 WDR77Q9BQA1 342 aaPredicted RBP8.78□□□□□ -1
NIF3L1-203ENST00000409129 SLC6A16Q9GZN6 736 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 MRM3Q9HC36 420 aaKnown RBP8.78□□□□□ -1
NIF3L1-203ENST00000409129 CUTCQ9NTM9 273 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 IL1RAPL1Q9NZN1 696 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 ANAPC5Q9UJX4 755 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 SLC39A10Q9ULF5 831 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 ENTPD4Q9Y227 616 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 CSAG2Q9Y5P2 127 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 HS3ST3B1Q9Y662 390 aa8.78□□□□□ -1
NIF3L1-203ENST00000409129 FITM1A5D6W6 292 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 VSTM2BA6NLU5 285 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 E7EVH7 732 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 PRMT5O14744 637 aaPredicted RBP8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 LIASO43766 372 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 PRICKLE3O43900 615 aaPredicted RBP8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 SRPX2O60687 465 aaPredicted RBP8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 ALOX12BO75342 701 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 FKBP9O95302 570 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 HOXB4P17483 251 aaPredicted RBP8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 MCM3P25205 808 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 OR1D4P47884 311 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 ZNF75DP51815 510 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 PRAMEP78395 509 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms