RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 HDDC3Q8N4P3 179 aa3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 CHCHD4Q8N4Q1 142 aa3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 GANCQ8TET4 914 aa3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 ATL1Q8WXF7 558 aa3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 N4BP2L2Q92802 583 aaPredicted RBP3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 KLK6Q92876 244 aa3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 ELSPBP1Q96BH3 223 aa3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 FBXL8Q96CD0 374 aa3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 CCDC138Q96M89 665 aa3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 PPM1MQ96MI6 270 aa3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 PKP4Q99569 1192 aa3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 ZBTB18Q99592 522 aa3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 ECSITQ9BQ95 431 aa3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 ACPTQ9BZG2 426 aa3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 KLHL4Q9C0H6 718 aa3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 C1orf109Q9NX04 203 aa3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 CLDND1Q9NY35 253 aa3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 CLEC1BQ9P126 229 aa3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 STOX2Q9P2F5 926 aaPredicted RBP3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 ZNF106Q9H2Y7 1883 aaKnown RBP3.87□□□□□ -1.79
LRRTM4-201ENST00000409088 NUP210Q8TEM1 1887 aaPredicted RBP3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 A0A1W2PP55 124 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 ZNF839A8K0R7 811 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 E7EQ34 232 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 ANKRD28O15084 1053 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 RNASEH2AO75792 299 aaKnown RBP3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 PAK4O96013 591 aaPredicted RBP3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 BCKDHAP12694 445 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 MRPL19P49406 292 aaKnown RBP3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 RHDQ02161 417 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 TRAP1Q12931 704 aaKnown RBP3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 ADAM15Q13444 863 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 FAM174BQ3ZCQ3 159 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 COQ5Q5HYK3 327 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 PIP5KL1Q5T9C9 394 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 FRG2Q64ET8 278 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 NANOGP8Q6NSW7 305 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 SUSD1Q6UWL2 747 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 ZNF765Q7L2R6 523 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 HEATR4Q86WZ0 1026 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 SPPL2CQ8IUH8 684 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 ZNF547Q8IVP9 402 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 KIAA2013Q8IYS2 634 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 SLC22A15Q8IZD6 547 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 LILRA2Q8N149 483 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 AADATQ8N5Z0 425 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 KRTCAP2Q8N6L1 136 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 L3MBTL4Q8NA19 623 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 RAB7BQ96AH8 199 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 TMEM125Q96AQ2 219 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 PPWD1Q96BP3 646 aaKnown RBP3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 HIC2Q96JB3 615 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 APOLD1Q96LR9 279 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 TSSK3Q96PN8 268 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 FRG2BQ96QU4 278 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 MTERF1Q99551 399 aaKnown RBP3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 PKP2Q99959 881 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 HDAC8Q9BY41 377 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 VCX3BQ9H321 246 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 NANOGQ9H9S0 305 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 C6orf203Q9P0P8 240 aaPredicted RBP3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 ABCD2Q9UBJ2 740 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 SERGEFQ9UGK8 458 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 DLGAP4Q9Y2H0 992 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 LRCH1Q9Y2L9 728 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 AP4S1Q9Y587 144 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 PCDHA9Q9Y5H5 950 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 PCYT1BQ9Y5K3 369 aaPredicted RBP3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 KCNE1BA0A087WTH5 132 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 CCDC85CA6NKD9 419 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 IFRD1O00458 451 aaPredicted RBP3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 LIN7AO14910 233 aaPredicted RBP3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 NPC1O15118 1278 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 LILRB5O75023 590 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 LRATO95237 230 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 C1orf105O95561 183 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 NCK1P16333 377 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 CD22P20273 847 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 ATP6V1B2P21281 511 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 JAK1P23458 1154 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 IMPA1P29218 277 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 EIF2DP41214 584 aaKnown RBP3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 GSK3BP49841 420 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 AQP4P55087 323 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 TAS2R38P59533 333 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 RPS14P62263 151 aaKnown RBP3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 LIPEQ05469 1076 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 DOC2AQ14183 400 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 KIAA0040Q15053 153 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 WSCD2Q2TBF2 565 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 BCL7AQ4VC05 210 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 SPANXN4Q5MJ08 99 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 PNCKQ6P2M8 343 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 DNAJC14Q6Y2X3 702 aaPredicted RBP3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 RALGPS2Q86X27 583 aaPredicted RBP3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 HID1Q8IV36 788 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 RASGRP3Q8IV61 690 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 C2orf73Q8N5S3 287 aaPredicted RBP3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 PHC3Q8NDX5 983 aa3.86□□□□□ -1.79
LRRTM4-201ENST00000409088 CANT1Q8WVQ1 401 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms