RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 SLC32A1Q9H598 525 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 WNT9AO14904 365 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 XPNPEP2O43895 674 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 AOC2O75106 756 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 ARHGEF15O94989 841 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 KCNK5O95279 499 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 CLDN9O95484 217 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 ITIH1P19827 911 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 CCNA2P20248 432 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 NR4A1P22736 598 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 PSMD7P51665 324 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 VLDLRP98155 873 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 GSTM4Q03013 218 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 ZC3H12BQ5HYM0 836 aaKnown RBP9.57□□□□□ -0.88
MSH2-202ENST00000406134 CD99L2Q8TCZ2 262 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 PYCR2Q96C36 320 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 YIPF6Q96EC8 236 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 MYOCQ99972 504 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 SLC12A9Q9BXP2 914 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 MRPL9Q9BYD2 267 aaKnown RBP9.57□□□□□ -0.88
MSH2-202ENST00000406134 TRIT1Q9H3H1 467 aaKnown RBP9.57□□□□□ -0.88
MSH2-202ENST00000406134 PFDN4Q9NQP4 134 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 TBCCD1Q9NVR7 557 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 TMEM202A6NGA9 273 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 BOLA2-SMG1P6H3BVE0 249 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 PITPNM1O00562 1244 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 PER2O15055 1255 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 ETHE1O95571 254 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 IMPDH2P12268 514 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 EPB42P16452 691 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 JUNDP17535 347 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 AKT1P31749 480 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 ARL1P40616 181 aaPredicted RBP9.57□□□□□ -0.88
MSH2-202ENST00000406134 BCL2L1Q07817 233 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 TMED1Q13445 227 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.57□□□□□ -0.88
MSH2-202ENST00000406134 LRRC73Q5JTD7 316 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 ANKRD13BQ86YJ7 626 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 WDR20Q8TBZ3 569 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 RAB2BQ8WUD1 216 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 LZICQ8WZA0 190 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 FOXJ1Q92949 421 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 EGFL8Q99944 293 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 AKIP1Q9NQ31 210 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 ABCB8Q9NUT2 735 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 PSME2Q9UL46 239 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 EXO1Q9UQ84 846 aaKnown RBP9.57□□□□□ -0.88
MSH2-202ENST00000406134 PCDHGA10Q9Y5H3 936 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 TCF20Q9UGU0 1960 aaKnown RBP9.57□□□□□ -0.88
MSH2-202ENST00000406134 TRANK1O15050 2925 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 UGT2B11O75310 529 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 ERN1O75460 977 aaKnown RBP9.56□□□□□ -0.88
MSH2-202ENST00000406134 KLHL18O94889 574 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 SOD2P04179 222 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 INHAP05111 366 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 UGT2B4P06133 528 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 ITGALP20701 1170 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 OPRL1P41146 370 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 RPIAP49247 311 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 SLC35A2P78381 396 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 MAD2L1Q13257 205 aaPredicted RBP9.56□□□□□ -0.88
MSH2-202ENST00000406134 GPR33Q49SQ1 333 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 IGFN1Q86VF2 1251 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 TERB1Q8NA31 727 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 TTC16Q8NEE8 873 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 OR7A2PQ8NGA2 310 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 CHPT1Q8WUD6 406 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 BORCS5Q969J3 196 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 SCRN2Q96FV2 425 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 SAMD11Q96NU1 681 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 TSSK3Q96PN8 268 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 TMEM184CQ9NVA4 438 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 C1orf226A1L170 272 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 NUAK1O60285 661 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 CLPXO76031 633 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 LRATO95237 230 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 ZBTB11O95625 1053 aaPredicted RBP9.56□□□□□ -0.88
MSH2-202ENST00000406134 S100BP04271 92 aaPredicted RBP9.56□□□□□ -0.88
MSH2-202ENST00000406134 CBSLP0DN79 551 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 ACPPP15309 386 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 HLA-FP30511 346 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 CBSP35520 551 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 RGS4P49798 205 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 CYP4F8P98187 520 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 SP3Q02447 781 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 ARHGEF7Q14155 803 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 SMN1Q16637 294 aaKnown RBP9.56□□□□□ -0.88
MSH2-202ENST00000406134 PLEKHG6Q3KR16 790 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 ADPRMQ3LIE5 342 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 TTLL9Q3SXZ7 439 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 ZNF658BQ4V348 819 aaPredicted RBP9.56□□□□□ -0.88
MSH2-202ENST00000406134 OR4F3Q6IEY1 312 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 VTCN1Q7Z7D3 282 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 SERPINA11Q86U17 422 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 ABHD11Q8NFV4 315 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 UBE2FQ969M7 185 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 FAM162AQ96A26 154 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 ZNF689Q96CS4 500 aaPredicted RBP9.56□□□□□ -0.88
MSH2-202ENST00000406134 DUSP21Q9H596 190 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 IL1RAPQ9NPH3 570 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms