RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 RPL21P46778 160 aaKnown RBP5.98□□□□□ -1.45
RPA3-204ENST00000406109 TTPAP49638 278 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 KPNA2P52292 529 aaKnown RBP5.98□□□□□ -1.45
RPA3-204ENST00000406109 RRADP55042 308 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 SOX8P57073 446 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 FOXL2P58012 376 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 SLC7A5Q01650 507 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 DHX9Q08211 1270 aaKnown RBP5.98□□□□□ -1.45
RPA3-204ENST00000406109 KRT33BQ14525 404 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 ITIH4Q14624 930 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 MYBPC3Q14896 1274 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 BRD3Q15059 726 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 NCF4Q15080 339 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 WHAMMP3Q1A5X7 153 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 PTCHD3Q3KNS1 767 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 BCL7AQ4VC05 210 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 MSS51Q4VC12 460 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 DNAJC21Q5F1R6 531 aaKnown RBP5.98□□□□□ -1.45
RPA3-204ENST00000406109 DCAF10Q5QP82 559 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 METRNLQ641Q3 311 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 PTRHD1Q6GMV3 140 aaKnown RBP5.98□□□□□ -1.45
RPA3-204ENST00000406109 MRNIPQ6NTE8 343 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 HIBCHQ6NVY1 386 aaPredicted RBP5.98□□□□□ -1.45
RPA3-204ENST00000406109 ZNF449Q6P9G9 518 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 MRGPREQ86SM8 312 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 HOOK3Q86VS8 718 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 SYTL1Q8IYJ3 562 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 PDIK1LQ8N165 341 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 AGGF1Q8N302 714 aaeCLIP5.98□□□□□ -1.45
RPA3-204ENST00000406109 GALNT16Q8N428 558 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 BBOF1Q8ND07 529 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 OR2L2Q8NH16 312 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 OR8K5Q8NH50 307 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 OR1L3Q8NH93 324 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 ZNF669Q96BR6 464 aaPredicted RBP5.98□□□□□ -1.45
RPA3-204ENST00000406109 CXorf40BQ96DE9 158 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 LURAP1Q96LR2 239 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 NRTNQ99748 197 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 EBNA1BP2Q99848 306 aaKnown RBP5.98□□□□□ -1.45
RPA3-204ENST00000406109 LRRC1Q9BTT6 524 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 WWP1Q9H0M0 922 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 C20orf96Q9NUD7 363 aaPredicted RBP5.98□□□□□ -1.45
RPA3-204ENST00000406109 HRASLS2Q9NWW9 162 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 IL1RAPL1Q9NZN1 696 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 MARCH4Q9P2E8 410 aaPredicted RBP5.98□□□□□ -1.45
RPA3-204ENST00000406109 ACSL5Q9ULC5 683 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 OSGIN2Q9Y236 505 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 UTP11Q9Y3A2 253 aaKnown RBP5.98□□□□□ -1.45
RPA3-204ENST00000406109 FAM169AQ9Y6X4 670 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 ATRQ13535 2644 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 TLN2Q9Y4G6 2542 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 NUP210LQ5VU65 1888 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 NBEAL1Q6ZS30 2694 aa5.98□□□□□ -1.45
RPA3-204ENST00000406109 INTS1Q8N201 2190 aaKnown RBP5.97□□□□□ -1.45
RPA3-204ENST00000406109 IGLV3-16A0A075B6K0 115 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 C17orf113A0A1B0GUU1 675 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 UBA6A0AVT1 1052 aaPredicted RBP5.97□□□□□ -1.45
RPA3-204ENST00000406109 CTAGE15A4D2H0 777 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 KLHL33A6NCF5 533 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 SLC9B1P1A6NJY1 282 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 IQCF5A8MTL0 148 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 PRSS44E7EML9 344 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 F8W8V4 182 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 NDC80O14777 642 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 PFDN6O15212 129 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 CNOT3O75175 753 aaKnown RBP5.97□□□□□ -1.45
RPA3-204ENST00000406109 BANF1O75531 89 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 USP1O94782 785 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 SEC31AO94979 1220 aaKnown RBP5.97□□□□□ -1.45
RPA3-204ENST00000406109 FTH1P02794 183 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 STSP08842 583 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 SLC35G4P0C7Q5 338 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 OR56A5P0C7T3 313 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 MSL3P1P0C860 447 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 CTAGE8P0CG41 777 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 PGAM1P18669 254 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 ELK3P41970 407 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 MAGEA3P43357 314 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 PREPP48147 710 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 GLRBP48167 497 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 ARCN1P48444 511 aaKnown RBP5.97□□□□□ -1.45
RPA3-204ENST00000406109 PRLHRP49683 370 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 PLTPP55058 493 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 CSE1LP55060 971 aaKnown RBP5.97□□□□□ -1.45
RPA3-204ENST00000406109 EIF3BP55884 814 aaKnown RBP5.97□□□□□ -1.45
RPA3-204ENST00000406109 ARL4CP56559 192 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 DMPKQ09013 629 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 CALCOCO2Q13137 446 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 CTBP1Q13363 440 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 ELOAQ14241 798 aaKnown RBP5.97□□□□□ -1.45
RPA3-204ENST00000406109 TRADDQ15628 312 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 LONRF1Q17RB8 773 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 ZXDCQ2QGD7 858 aaPredicted RBP5.97□□□□□ -1.45
RPA3-204ENST00000406109 AARS2Q5JTZ9 985 aaKnown RBP5.97□□□□□ -1.45
RPA3-204ENST00000406109 DNTTIP2Q5QJE6 756 aaKnown RBP5.97□□□□□ -1.45
RPA3-204ENST00000406109 DUPD1Q68J44 220 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 KIAA0930Q6ICG6 404 aaPredicted RBP5.97□□□□□ -1.45
RPA3-204ENST00000406109 NEPROQ6NW34 567 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 IGFL2Q6UWQ7 119 aa5.97□□□□□ -1.45
RPA3-204ENST00000406109 PACS1Q6VY07 963 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms