RNA–Protein interactions for RNA: ENST00000405885.6

IRF1-202, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IRF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-202ENST00000405885 NAA25Q14CX7 972 aa16.33■□□□□ 0.21
IRF1-202ENST00000405885 USP39Q53GS9 565 aaKnown RBP16.33■□□□□ 0.21
IRF1-202ENST00000405885 ASRGL1Q7L266 308 aa16.33■□□□□ 0.21
IRF1-202ENST00000405885 KLHDC8AQ8IYD2 350 aa16.33■□□□□ 0.21
IRF1-202ENST00000405885 CPSF7Q8N684 471 aaKnown RBP16.33■□□□□ 0.21
IRF1-202ENST00000405885 L3MBTL4Q8NA19 623 aa16.33■□□□□ 0.21
IRF1-202ENST00000405885 CADM4Q8NFZ8 388 aa16.33■□□□□ 0.21
IRF1-202ENST00000405885 OR52E1Q8NGJ3 308 aa16.33■□□□□ 0.21
IRF1-202ENST00000405885 CAMK1GQ96NX5 476 aa16.33■□□□□ 0.21
IRF1-202ENST00000405885 SPNS1Q9H2V7 528 aa16.33■□□□□ 0.21
IRF1-202ENST00000405885 STK38LQ9Y2H1 464 aa16.33■□□□□ 0.21
IRF1-202ENST00000405885 A6NCN8 305 aa16.33■□□□□ 0.2
IRF1-202ENST00000405885 LSM1O15116 133 aaKnown RBP16.33■□□□□ 0.2
IRF1-202ENST00000405885 RPN2P04844 631 aa16.33■□□□□ 0.2
IRF1-202ENST00000405885 MTHFD1P11586 935 aaKnown RBP16.33■□□□□ 0.2
IRF1-202ENST00000405885 GNAZP19086 355 aa16.33■□□□□ 0.2
IRF1-202ENST00000405885 FNTBP49356 437 aa16.33■□□□□ 0.2
IRF1-202ENST00000405885 FAM20CQ8IXL6 584 aa16.33■□□□□ 0.2
IRF1-202ENST00000405885 USP7Q93009 1102 aa16.33■□□□□ 0.2
IRF1-202ENST00000405885 KLHL29Q96CT2 875 aa16.33■□□□□ 0.2
IRF1-202ENST00000405885 SPACA7Q96KW9 195 aa16.33■□□□□ 0.2
IRF1-202ENST00000405885 MIPEPQ99797 713 aa16.33■□□□□ 0.2
IRF1-202ENST00000405885 ACPTQ9BZG2 426 aa16.33■□□□□ 0.2
IRF1-202ENST00000405885 TRNAU1APQ9NX07 287 aaKnown RBP16.33■□□□□ 0.2
IRF1-202ENST00000405885 TAC3Q9UHF0 121 aa16.33■□□□□ 0.2
IRF1-202ENST00000405885 TAGLN3Q9UI15 199 aa16.33■□□□□ 0.2
IRF1-202ENST00000405885 KCNE2Q9Y6J6 123 aa16.33■□□□□ 0.2
IRF1-202ENST00000405885 A0A1W2PPV9 198 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 A0A1W2PR77 199 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 KCNJ13O60928 360 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 SH3BGRLO75368 114 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 TNFP01375 233 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 ERGP11308 486 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 LBPP18428 481 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 CALB2P22676 271 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 CD38P28907 300 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 PTK2BQ14289 1009 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 NR6A1Q15406 480 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 GGTA1PQ4G0N0 100 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 RFTN2Q52LD8 501 aaPredicted RBP16.32■□□□□ 0.2
IRF1-202ENST00000405885 C6orf136Q5SQH8 315 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 PAOXQ6QHF9 649 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 ABRAXAS1Q6UWZ7 409 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 SLCO4C1Q6ZQN7 724 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 RGL4Q8IZJ4 473 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 NUDT8Q8WV74 236 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 SELENOMQ8WWX9 145 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 EDAQ92838 391 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 MTERF1Q99551 399 aaKnown RBP16.32■□□□□ 0.2
IRF1-202ENST00000405885 ELOVL6Q9H5J4 265 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 TM9SF3Q9HD45 589 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 CCDC167Q9P0B6 97 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 LNPEPQ9UIQ6 1025 aa16.32■□□□□ 0.2
IRF1-202ENST00000405885 JUPP14923 745 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 CORO7P57737 925 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 ILF3Q12906 894 aaKnown RBP eCLIP16.31■□□□□ 0.2
IRF1-202ENST00000405885 DDX39BQ13838 428 aaKnown RBP16.31■□□□□ 0.2
IRF1-202ENST00000405885 PRRT3Q5FWE3 981 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 PRAMEF13Q5VWM6 474 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 RIPOR1Q6ZS17 1223 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 GK5Q6ZS86 529 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 EFL1Q7Z2Z2 1120 aaKnown RBP16.31■□□□□ 0.2
IRF1-202ENST00000405885 PARGQ86W56 976 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 SNX32Q86XE0 403 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 PHACTR4Q8IZ21 702 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 FNDC5Q8NAU1 212 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 ZNF740Q8NDX6 193 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 C1orf216Q8TAB5 229 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 TEX37Q96LM6 180 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 ICKQ9UPZ9 632 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 TOR1BO14657 336 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 COX4I1P13073 169 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 SLC19A1P41440 591 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 CSNK1EP49674 416 aaKnown RBP16.31■□□□□ 0.2
IRF1-202ENST00000405885 CYP2A13Q16696 494 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 KIF19Q2TAC6 998 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 AP5B1Q2VPB7 878 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 ATP6AP1LQ52LC2 224 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 FRG2Q64ET8 278 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 GPBAR1Q8TDU6 330 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 FRG2BQ96QU4 278 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 SLC29A3Q9BZD2 475 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 ACTR5Q9H9F9 607 aaPredicted RBP16.31■□□□□ 0.2
IRF1-202ENST00000405885 CUEDC1Q9NWM3 386 aaPredicted RBP16.31■□□□□ 0.2
IRF1-202ENST00000405885 TAS2R1Q9NYW7 299 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 TAAR2Q9P1P5 351 aa16.31■□□□□ 0.2
IRF1-202ENST00000405885 B2RBV5 119 aa16.3■□□□□ 0.2
IRF1-202ENST00000405885 NRP2O60462 931 aa16.3■□□□□ 0.2
IRF1-202ENST00000405885 KRT6AP02538 564 aa16.3■□□□□ 0.2
IRF1-202ENST00000405885 KRT6BP04259 564 aa16.3■□□□□ 0.2
IRF1-202ENST00000405885 CDH1P12830 882 aa16.3■□□□□ 0.2
IRF1-202ENST00000405885 F3P13726 295 aa16.3■□□□□ 0.2
IRF1-202ENST00000405885 JUNDP17535 347 aa16.3■□□□□ 0.2
IRF1-202ENST00000405885 NUDT1P36639 197 aa16.3■□□□□ 0.2
IRF1-202ENST00000405885 KRT6CP48668 564 aa16.3■□□□□ 0.2
IRF1-202ENST00000405885 RAB28P51157 221 aa16.3■□□□□ 0.2
IRF1-202ENST00000405885 RACK1P63244 317 aaKnown RBP16.3■□□□□ 0.2
IRF1-202ENST00000405885 LIPJQ5W064 366 aa16.3■□□□□ 0.2
IRF1-202ENST00000405885 TRIM46Q7Z4K8 759 aa16.3■□□□□ 0.2
IRF1-202ENST00000405885 MFSD2AQ8NA29 543 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms