RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 DCBLD1Q8N8Z6 715 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 L3MBTL4Q8NA19 623 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 OR5AR1Q8NGP9 310 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 ZNF480Q8WV37 535 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 SNX19Q92543 992 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 PTCD3Q96EY7 689 aaKnown RBP20.36■□□□□ 0.85
TPM1-208ENST00000404484 CATSPER2Q96P56 530 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 ZNF385DQ9H6B1 395 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 AKTIPQ9H8T0 292 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 RXFP3Q9NSD7 469 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 TRNAU1APQ9NX07 287 aaKnown RBP20.36■□□□□ 0.85
TPM1-208ENST00000404484 POLG2Q9UHN1 485 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 HEBP2Q9Y5Z4 205 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 KCNE2Q9Y6J6 123 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 KRT87PA6NCN2 255 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 PDZK1P1A8MUH7 402 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 KDM1AO60341 852 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 GDF9O60383 454 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 LINC00032P0C843 101 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 T-ENOLP0DO92 83 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 RPL10P27635 214 aaKnown RBP20.35■□□□□ 0.85
TPM1-208ENST00000404484 HALP42357 657 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 ATP4BP51164 291 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 KLF10Q13118 480 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 SQLEQ14534 574 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 UAP1L1Q3KQV9 507 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 PEAR1Q5VY43 1037 aaPredicted RBP20.35■□□□□ 0.85
TPM1-208ENST00000404484 LIPJQ5W064 366 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 IL27RAQ6UWB1 636 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 WASH2PQ6VEQ5 465 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 MYLK4Q86YV6 388 aaPredicted RBP20.35■□□□□ 0.85
TPM1-208ENST00000404484 TREML1Q86YW5 311 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 DCP2Q8IU60 420 aaKnown RBP20.35■□□□□ 0.85
TPM1-208ENST00000404484 KLHL29Q96CT2 875 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 C3orf30Q96M34 536 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 C12orf66Q96MD2 445 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 MIPEPQ99797 713 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 MVB12BQ9H7P6 319 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 WASH6PQ9NQA3 447 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 SNX6Q9UNH7 406 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 RNF11Q9Y3C5 154 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 DGKBQ9Y6T7 804 aa20.35■□□□□ 0.85
TPM1-208ENST00000404484 ATP6AP2A0A1C7CYW4 349 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 CFAP73A6NFT4 308 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 SLC28A1O00337 649 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 ATP6AP2O75787 350 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 STX1BP61266 288 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 TBPL1P62380 186 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 CTBSQ01459 385 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 IRF8Q02556 426 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 OGFOD2Q6N063 350 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 SPATA19Q7Z5L4 167 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 RGL4Q8IZJ4 473 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 OR13H1Q8NG92 308 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 DNASE2BQ8WZ79 361 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 SGPP1Q9BX95 441 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 RAB11FIP5Q9BXF6 653 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 LRMDAQ9H2I8 198 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 CCDC177Q9NQR7 707 aaPredicted RBP20.34■□□□□ 0.85
TPM1-208ENST00000404484 INTS7Q9NVH2 962 aaKnown RBP20.34■□□□□ 0.85
TPM1-208ENST00000404484 DYRK1BQ9Y463 629 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 ANKRD65E5RJM6 399 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 KHNYNO15037 678 aaKnown RBP20.34■□□□□ 0.85
TPM1-208ENST00000404484 ULK1O75385 1050 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 TNFP01375 233 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 GNAZP19086 355 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 CD27P26842 260 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 ZNF33BQ06732 778 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 CHIT1Q13231 466 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 KRT33BQ14525 404 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 ALG11Q2TAA5 492 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 WDR45BQ5MNZ6 344 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 TMEM198Q66K66 360 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 SETD7Q8WTS6 366 aaKnown RBP20.34■□□□□ 0.85
TPM1-208ENST00000404484 TSACCQ96A04 125 aaPredicted RBP20.34■□□□□ 0.85
TPM1-208ENST00000404484 FERD3LQ96RJ6 166 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 GPR27Q9NS67 375 aa20.34■□□□□ 0.85
TPM1-208ENST00000404484 TDRKHQ9Y2W6 561 aaKnown RBP20.34■□□□□ 0.85
TPM1-208ENST00000404484 COPG1Q9Y678 874 aaKnown RBP20.34■□□□□ 0.85
TPM1-208ENST00000404484 TNRC6BQ9UPQ9 1833 aaKnown RBP20.33■□□□□ 0.85
TPM1-208ENST00000404484 MEI4A8MW99 385 aa20.33■□□□□ 0.84
TPM1-208ENST00000404484 MANBAO00462 879 aa20.33■□□□□ 0.84
TPM1-208ENST00000404484 RGS14O43566 566 aa20.33■□□□□ 0.84
TPM1-208ENST00000404484 FOXD2O60548 495 aaPredicted RBP20.33■□□□□ 0.84
TPM1-208ENST00000404484 RASGRP1O95267 797 aa20.33■□□□□ 0.84
TPM1-208ENST00000404484 PRR35P0CG20 571 aa20.33■□□□□ 0.84
TPM1-208ENST00000404484 THEGLP0DJG4 465 aa20.33■□□□□ 0.84
TPM1-208ENST00000404484 ERGP11308 486 aa20.33■□□□□ 0.84
TPM1-208ENST00000404484 HNF4AP41235 474 aa20.33■□□□□ 0.84
TPM1-208ENST00000404484 NAA25Q14CX7 972 aa20.33■□□□□ 0.84
TPM1-208ENST00000404484 HERC3Q15034 1050 aa20.33■□□□□ 0.84
TPM1-208ENST00000404484 ATP6AP1LQ52LC2 224 aa20.33■□□□□ 0.84
TPM1-208ENST00000404484 TRIM61Q5EBN2 209 aa20.33■□□□□ 0.84
TPM1-208ENST00000404484 TPRG1LQ5T0D9 272 aa20.33■□□□□ 0.84
TPM1-208ENST00000404484 RD3Q7Z3Z2 195 aa20.33■□□□□ 0.84
TPM1-208ENST00000404484 USP7Q93009 1102 aa20.33■□□□□ 0.84
TPM1-208ENST00000404484 KLHDC7BQ96G42 594 aa20.33■□□□□ 0.84
TPM1-208ENST00000404484 INSM2Q96T92 566 aaPredicted RBP20.33■□□□□ 0.84
TPM1-208ENST00000404484 PCBD2Q9H0N5 130 aa20.33■□□□□ 0.84
TPM1-208ENST00000404484 ELOVL6Q9H5J4 265 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms