RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 TRIM71Q2Q1W2 868 aaKnown RBP12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 COQ5Q5HYK3 327 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 Q6ZVL8 140 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 C11orf96Q7Z7L8 435 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 NDNFQ8TB73 568 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 PIH1D2Q8WWB5 315 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 PYURFQ96I23 114 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 CLSTN3Q9BQT9 956 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 INPPL1O15357 1258 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 CLPXO76031 633 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 SERPIND1P05546 499 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 ACRV1P26436 265 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 CD300CQ08708 224 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 LMAN2Q12907 356 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 CBX3Q13185 183 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 PCBP2Q15366 365 aaKnown RBP eCLIP12.33□□□□□ -0.443e-8■■■■■ 34.3
PPP4R1-202ENST00000400555 SKIV2LQ15477 1246 aaKnown RBP12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 CARD16Q5EG05 197 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 DGKKQ5KSL6 1271 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 DDX53Q86TM3 631 aaKnown RBP12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 ABHD11Q8NFV4 315 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 OR5K1Q8NHB7 308 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 ZNF461Q8TAF7 563 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 RAB2BQ8WUD1 216 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 TADA1Q96BN2 335 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 PLD4Q96BZ4 506 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 BRD9Q9H8M2 597 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 KCTD5Q9NXV2 234 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 VNN3Q9NY84 501 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 NUMA1Q14980 2115 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 PRR35P0CG20 571 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 HNF4AP41235 474 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 TMED10P49755 219 aaKnown RBP12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 BTG3Q14201 252 aaPredicted RBP12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 INAQ16352 499 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 DCP2Q8IU60 420 aaKnown RBP12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 CLIP4Q8N3C7 705 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 LILRA3Q8N6C8 439 aaPredicted RBP12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 LEMD2Q8NC56 503 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 CYB5D2Q8WUJ1 264 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 CSF3RQ99062 836 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 SLC32A1Q9H598 525 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 HMX1Q9NP08 348 aaPredicted RBP12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 MT-ND2P03891 347 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 LCKP06239 509 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 PAX3P23760 479 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 MLLT10P55197 1068 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 DAB2P98082 770 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 CHST14Q8NCH0 376 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 SPATA17Q96L03 361 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 OSBPL10Q9BXB5 764 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 MRPL17Q9NRX2 175 aaKnown RBP12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 PAIP2BQ9ULR5 123 aaKnown RBP12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 OARD1Q9Y530 152 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 MYO10Q9HD67 2058 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 ZNF99A8MXY4 864 aaPredicted RBP12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 H0YAE9 185 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 UPK1AO00322 258 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 KPNA5O15131 536 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 F11P03951 625 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 INHAP05111 366 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 HMGA1P17096 107 aaKnown RBP12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 ST13P50502 369 aaKnown RBP12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 ZNF697Q5TEC3 545 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 DPY19L3Q6ZPD9 716 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 USP45Q70EL2 814 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 CYP4Z1Q86W10 505 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 ZSWIM9Q86XI8 627 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 MSRB3Q8IXL7 192 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 MAGEE1Q9HCI5 957 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 RHCGQ9UBD6 479 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 MTRRQ9UBK8 725 aa12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 TDRD15B5MCY1 1934 aaKnown RBP12.32□□□□□ -0.44
PPP4R1-202ENST00000400555 CAPNS1P04632 268 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 SDC1P18827 310 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 NSG1P42857 185 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 GRIK2Q13002 908 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 CRTC1Q6UUV9 634 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 IGFN1Q86VF2 1251 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 RIMKLAQ8IXN7 391 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 OR8J3Q8NGG0 315 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 ZFP90Q8TF47 636 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 TAMM41Q96BW9 452 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 MAGED4Q96JG8 741 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 HSH2DQ96JZ2 352 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 P2RY13Q9BPV8 354 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 WRAP53Q9BUR4 548 aaKnown RBP12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 P2RY12Q9H244 342 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 SGK2Q9HBY8 427 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 ZDHHC4Q9NPG8 344 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 SACM1LQ9NTJ5 587 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 B4GALT6Q9UBX8 382 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 OGDHLQ9ULD0 1010 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 TPRKBQ9Y3C4 175 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 MAP4K5Q9Y4K4 846 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 TSC2P49815 1807 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 DLGAP3O95886 979 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 FUCA1P04066 466 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 LAMP1P11279 417 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 DCKP27707 260 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms