RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 IRAK4Q9NWZ3 460 aa14.28□□□□□ -0.12
SMIM11A-203ENST00000399299 TSR3Q9UJK0 312 aaKnown RBP14.28□□□□□ -0.12
SMIM11A-203ENST00000399299 ANAPC2Q9UJX6 822 aa14.28□□□□□ -0.12
SMIM11A-203ENST00000399299 TLK1Q9UKI8 766 aa14.28□□□□□ -0.12
SMIM11A-203ENST00000399299 KLHL20Q9Y2M5 609 aa14.28□□□□□ -0.12
SMIM11A-203ENST00000399299 MED13Q9UHV7 2174 aa14.27□□□□□ -0.12
SMIM11A-203ENST00000399299 ZNF839A8K0R7 811 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 SRPX2O60687 465 aaPredicted RBP14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 KLF7O75840 302 aaPredicted RBP14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 HAUS5O94927 633 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 PSMB5P28074 263 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 PAFAH1B1P43034 410 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 MPP1Q00013 466 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 NKAIN1Q4KMZ8 207 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 MSS51Q4VC12 460 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 KIAA0408Q6ZU52 694 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 GALNT7Q86SF2 657 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 PTRH1Q86Y79 214 aaKnown RBP14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 CNTN4Q8IWV2 1026 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 PDIK1LQ8N165 341 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 ASB11Q8WXH4 323 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 SMPDL3AQ92484 453 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 LRRC39Q96DD0 335 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 GPR21Q99679 349 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 ZNF71Q9NQZ8 489 aaPredicted RBP14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 IARS2Q9NSE4 1012 aaKnown RBP14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 ANKMY1Q9P2S6 941 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 DHCR7Q9UBM7 475 aaKnown RBP14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 TP53TG5Q9Y2B4 290 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 ANKRD12Q6UB98 2062 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 HEATR5BQ9P2D3 2071 aa14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 FLNBO75369 2602 aaKnown RBP14.27□□□□□ -0.13
SMIM11A-203ENST00000399299 CCDC88CQ9P219 2028 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 SETXQ7Z333 2677 aaKnown RBP14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 A0A1B0GX78 115 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 OR2A25A4D2G3 310 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 FITM1A5D6W6 292 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 GFYI3L273 518 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 CTSVO60911 334 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 VPS26AO75436 327 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 BANF1O75531 89 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 ONECUT2O95948 504 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 F7P08709 466 aaPredicted RBP14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 CMPK1P30085 196 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 CUL1Q13616 776 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 FASTKQ14296 549 aaKnown RBP14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 GRM7Q14831 915 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 BBS9Q3SYG4 887 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 C1orf189Q5VU69 101 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 LRRC8EQ6NSJ5 796 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 MRPL14Q6P1L8 145 aaKnown RBP14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 RNF44Q7L0R7 432 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 RAB43Q86YS6 212 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 KLHL7Q8IXQ5 586 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 CERS2Q96G23 380 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 IP6K3Q96PC2 410 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 MIPEPQ99797 713 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 SELENOSQ9BQE4 189 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 TRIM55Q9BYV6 548 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 ING2Q9H160 280 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 IFT80Q9P2H3 777 aaPredicted RBP14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 NDOR1Q9UHB4 597 aa14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 GPN3Q9UHW5 284 aaPredicted RBP14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 PCDHGA9Q9Y5G4 932 aaKnown RBP14.26□□□□□ -0.13
SMIM11A-203ENST00000399299 PRRC2CQ9Y520 2896 aaKnown RBP14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 ARGFXA6NJG6 315 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 DSCR3O14972 297 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 FANCGO15287 622 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 ZBTB14O43829 449 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 DNAJB5O75953 348 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 SEC31AO94979 1220 aaKnown RBP14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 SLC16A8O95907 504 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 ERVK-10P10266 1014 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 CASRP41180 1078 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 SKIV2L2P42285 1042 aaKnown RBP14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 PNLIPRP1P54315 467 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 RRADP55042 308 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 KLRB1Q12918 225 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 HIF1AQ16665 826 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 FAM69BQ5VUD6 431 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 MLIPQ5VWP3 458 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 CPZQ66K79 652 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 UGT3A1Q6NUS8 523 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 HIBCHQ6NVY1 386 aaPredicted RBP14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 CYHR1Q6ZMK1 362 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 MED25Q71SY5 747 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 TMEM102Q8N9M5 508 aaPredicted RBP14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 TTC29Q8NA56 475 aaPredicted RBP14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 OR2Y1Q8NGV0 311 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 ZNF480Q8WV37 535 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 FKBP10Q96AY3 582 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 SNF8Q96H20 258 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 PKP4Q99569 1192 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 MLXIPLQ9NP71 852 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 ACSS2Q9NR19 701 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 TRMT6Q9UJA5 497 aaKnown RBP14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 NUP210LQ5VU65 1888 aa14.25□□□□□ -0.13
SMIM11A-203ENST00000399299 NDC80O14777 642 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 TTI1O43156 1089 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 CEACAM4O75871 244 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms