RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 CDH22Q9UJ99 828 aa13.93□□□□□ -0.18
PCDHA11-201ENST00000398640 RPL26L1Q9UNX3 145 aaKnown RBP13.93□□□□□ -0.18
PCDHA11-201ENST00000398640 IGKV6D-21A0A0A0MT36 114 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 ADAMTS4O75173 837 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 JAM2P57087 298 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 PON2Q15165 354 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 CARTPTQ16568 116 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 RTP2Q5QGT7 225 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 PLA2G15Q8NCC3 412 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 OR10H4Q8NGA5 316 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 OR4C6Q8NH72 309 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 GRHL3Q8TE85 626 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 PYCR2Q96C36 320 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 RAB11FIP5Q9BXF6 653 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 AREL1O15033 823 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 HMGB3O15347 200 aaKnown RBP13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 LDB2O43679 373 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 PCDHGA12O60330 932 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 PLIN3O60664 434 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 IL33O95760 270 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 CCNFP41002 786 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 SLC1A2P43004 574 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 RASGEF1CQ8N431 466 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 TOP1MTQ969P6 601 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 TBX5Q99593 518 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 HYKKA2RU49 373 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 B4GALT2O60909 372 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 OXTRP30559 389 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 GANABQ14697 944 aaKnown RBP13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 CRELD2Q6UXH1 353 aaPredicted RBP13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 PQLC1Q8N2U9 271 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 IFT27Q9BW83 186 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 SALL4Q9UJQ4 1053 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 WRBO00258 174 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 ZNF432O94892 652 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 CCNB2O95067 398 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 CYB5AP00167 134 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 HOXB6P17509 224 aaKnown RBP13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 GRIA2P42262 883 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 BDKRB1P46663 353 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 DUSP3P51452 185 aaPredicted RBP13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 CCR8P51685 355 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 TOR1AIP1Q5JTV8 583 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 TMPRSS9Q7Z410 1059 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 ZNF598Q86UK7 904 aaKnown RBP13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 CCDC54Q8NEL0 328 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 TRPV1Q8NER1 839 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 MCFD2Q8NI22 146 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 COQ8BQ96D53 544 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 TMEM209Q96SK2 561 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 COCHO43405 550 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 FUT4P22083 530 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 PBX1P40424 430 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 CDKN1CP49918 316 aaPredicted RBP13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 RPS6KA3P51812 740 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 RUNX3Q13761 415 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 PUM1Q14671 1186 aaKnown RBP eCLIP13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 MAPK14Q16539 360 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 FBXL22Q6P050 247 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 LRRTM4Q86VH4 590 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 IL22RA1Q8N6P7 574 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 ARL10Q8N8L6 244 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 TBC1D17Q9HA65 648 aa13.92□□□□□ -0.18
PCDHA11-201ENST00000398640 CAPN8A6NHC0 703 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 SYPP08247 313 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 PTGER3P43115 390 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 SYPL2Q5VXT5 272 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 SLC9B2Q86UD5 537 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 CPNE8Q86YQ8 564 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 AVL9Q8NBF6 648 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 KLHDC7BQ96G42 594 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 CASD1Q96PB1 797 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 A0A1W2PQ72 361 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 RGS10O43665 173 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 TGFB1P01137 390 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 PIM1P11309 404 aaPredicted RBP13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 RPL5P46777 297 aaKnown RBP13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 TMEM125Q96AQ2 219 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 ZNF599Q96NL3 588 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 NELL2Q99435 816 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 S100A14Q9HCY8 104 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 ZNF726A6NNF4 738 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 CHRNB2P17787 502 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 SP140Q13342 867 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 BRAT1Q6PJG6 821 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 IRF2BP1Q8IU81 584 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 SLC39A11Q8N1S5 342 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 FAM156AQ8NDB6 213 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 OR4K17Q8NGC6 315 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 HTRA1Q92743 480 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 SLC22A18Q96BI1 424 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 SMOQ99835 787 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 HCRTO43612 131 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 ATP5A1P25705 553 aaKnown RBP13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 HGSNATQ68CP4 663 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 MPP5Q8N3R9 675 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 NAXEQ8NCW5 288 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 OR2L3Q8NG85 312 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 CRTAC1Q9NQ79 661 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms