RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 PARP8Q8N3A8 854 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 TRPV1Q8NER1 839 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 ZMIZ2Q8NF64 920 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 AP3S1Q92572 193 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 BORCS5Q969J3 196 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 CMTM7Q96FZ5 175 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 RBM18Q96H35 190 aaKnown RBP13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 FANCEQ9HB96 536 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 THUMPD1Q9NXG2 353 aaKnown RBP13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 ZNF624Q9P2J8 865 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 RNF11Q9Y3C5 154 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 TMEM189-UBE2V1I3L0A0 370 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 SCAMP1O15126 338 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 OAS1P00973 400 aaKnown RBP13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 RHOP08100 348 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 ENGP17813 658 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 CPN2P22792 545 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 CD68P34810 354 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 TIE1P35590 1138 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 SPANXN4Q5MJ08 99 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 PERM1Q5SV97 790 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 TNFAIP8L2Q6P589 184 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 FAM129CQ86XR2 697 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 SCML4Q8N228 414 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 OXR1Q8N573 874 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 RGMAQ96B86 450 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 SPATA7Q9P0W8 599 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 PRKD3O94806 890 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 GSRP00390 522 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 GGT5P36269 586 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 AGTR2P50052 363 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 ZNF155Q12901 538 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 ZNF776Q68DI1 518 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 COMMD2Q86X83 199 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 ST13P5Q8NFI4 369 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 PSMA8Q8TAA3 256 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 WDR12Q9GZL7 423 aaKnown RBP13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 FAM120CQ9NX05 1096 aaKnown RBP13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 GIMAP2Q9UG22 337 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 CCDC85CA6NKD9 419 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 AGRPO00253 132 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 NME6O75414 186 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 SAGP10523 405 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 ITPKBP27987 946 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 HMGCLP35914 325 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 BDKRB1P46663 353 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 KHKP50053 298 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 DUOXA1Q1HG43 343 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 MZT2BQ6NZ67 158 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 SLCO6A1Q86UG4 719 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 HEATR4Q86WZ0 1026 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 POC5Q8NA72 575 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 PRORSD1PA6NEY8 169 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 TMCC2O75069 709 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 RAB14P61106 215 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 KCNC3Q14003 757 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 RTL4Q6ZR62 310 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 CHCHD4Q8N4Q1 142 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 C3orf58Q8NDZ4 430 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 ANKRD49Q8WVL7 239 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 PKP2Q99959 881 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 TIMMDC1Q9NPL8 285 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 ELOVL2Q9NXB9 296 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 HNRNPA1P09651 372 aaKnown RBP eCLIP13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 CSNK2A2P19784 350 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 STK19P49842 368 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 CRISP3P54108 245 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 TMEM115Q12893 351 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 UNC50Q53HI1 259 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 ZNF805Q5CZA5 627 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 GPATCH1Q9BRR8 931 aaKnown RBP13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 NOL6Q9H6R4 1146 aaKnown RBP13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 FZD4Q9ULV1 537 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 GLI3P10071 1580 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 B3GALT2O43825 422 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 MYL9P24844 172 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 DIO3P55073 304 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 RABL3Q5HYI8 236 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 SNAP47Q5SQN1 464 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 ENPP7Q6UWV6 458 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 TMIGD1Q6UXZ0 262 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 TMC8Q8IU68 726 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 PEX5LQ8IYB4 626 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 TTC9BQ8N6N2 239 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 TRIB3Q96RU7 358 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 FBXL12Q9NXK8 326 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 A0A1B0GUL6 1792 aa13.87□□□□□ -0.19
PCDHGA11-201ENST00000398587 SCN2BO60939 215 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 LEFTY1O75610 366 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 FDXRP22570 491 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 PSMA1P25786 263 aaKnown RBP13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 ALDH4A1P30038 563 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 EIF2B2P49770 351 aaKnown RBP13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 SCARB2Q14108 478 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 TRIM71Q2Q1W2 868 aaKnown RBP13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 ERMP1Q7Z2K6 904 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 ZNF598Q86UK7 904 aaKnown RBP13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 ENDOVQ8N8Q3 282 aaKnown RBP13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 PIGXQ8TBF5 258 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms