RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 IER5LQ5T953 404 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 INTS11Q5TA45 600 aaKnown RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 DEPDC4Q8N2C3 294 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 GPR26Q8NDV2 337 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 OR7A2PQ8NGA2 310 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 OR52J3Q8NH60 311 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF583Q96ND8 569 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 TRIB3Q96RU7 358 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF382Q96SR6 550 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 KLF16Q9BXK1 252 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ABCB8Q9NUT2 735 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 PFDN2Q9UHV9 154 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ATPIF1Q9UII2 106 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 C3orf18Q9UK00 162 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SARDHQ9UL12 918 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 H3BMQ9 156 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 RGS10O43665 173 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ALDH1A1P00352 501 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ANXA4P09525 319 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SLC2A2P11168 524 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 BCKDHAP12694 445 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ALDH9A1P49189 494 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 CLCN4P51793 760 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 MEF2AQ02078 507 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 MBTPS1Q14703 1052 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 TYSND1Q2T9J0 566 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SNAP47Q5SQN1 464 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 C6orf141Q5SZD1 244 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 CERS6Q6ZMG9 384 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 HIPK1Q86Z02 1210 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SVOPQ8N4V2 548 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 FAM160A2Q8N612 972 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 C1orf52Q8N6N3 182 aaKnown RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 PROKR1Q8TCW9 393 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SLC22A17Q8WUG5 538 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 GAB3Q8WWW8 586 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 NCSTNQ92542 709 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 COG8Q96MW5 612 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF641Q96N77 438 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 INPP5KQ9BT40 448 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 MUC13Q9H3R2 512 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 REEP1Q9H902 201 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ZDHHC3Q9NYG2 299 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SLC22A14Q9Y267 594 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 OTOFQ9HC10 1997 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SMAD6O43541 496 aaKnown RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 GMFGO60234 142 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 UGT2B11O75310 529 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ANGPTL1O95841 491 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 PENKP01210 267 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 CYP2A6P11509 494 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 TTKP33981 857 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SNRPD1P62314 119 aaKnown RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF773Q6PK81 442 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 USP45Q70EL2 814 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SVOPLQ8N434 492 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 PIH1D2Q8WWB5 315 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 FOXJ1Q92949 421 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 TMEM159Q96B96 161 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 PLEKHA8Q96JA3 519 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 BIRC8Q96P09 236 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 C2orf49Q9BVC5 232 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 TRNAU1APQ9NX07 287 aaKnown RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 RPH3AQ9Y2J0 694 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 MAST2Q6P0Q8 1798 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 A0A1W2PRU2 124 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 TMEM88BA6NKF7 163 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 INPPL1O15357 1258 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 KLKB1P03952 638 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 MAGEA8P43361 318 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 CDH12P55289 794 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 TIAL1Q01085 375 aaKnown RBP eCLIP4.8□□□□□ -1.646e-7■□□□□ 9.5
SMAD4-202ENST00000398417 SPIBQ01892 262 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 COL9A2Q14055 689 aaPredicted RBP4.8□□□□□ -1.64
SMAD4-202ENST00000398417 TCTN1Q2MV58 587 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 LYPLAL1Q5VWZ2 237 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 SLC15A4Q8N697 577 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 NODALQ96S42 347 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 C6orf62Q9GZU0 229 aaPredicted RBP4.8□□□□□ -1.64
SMAD4-202ENST00000398417 LHPPQ9H008 270 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 SELENONQ9NZV5 590 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 RHCGQ9UBD6 479 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 ITGB1BP2Q9UKP3 347 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 ARNTLO00327 626 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 RNGTTO60942 597 aaKnown RBP4.8□□□□□ -1.64
SMAD4-202ENST00000398417 HSMCR30P0CW71 290 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 BPIP17213 487 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 HNF4AP41235 474 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 EPS8Q12929 822 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 CBX3Q13185 183 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 LRRC66Q68CR7 880 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF605Q86T29 641 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 TMEM173Q86WV6 379 aaPredicted RBP4.8□□□□□ -1.64
SMAD4-202ENST00000398417 PHYKPLQ8IUZ5 450 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF683Q8IZ20 524 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 CENPSQ8N2Z9 138 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 STON2Q8WXE9 905 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 IGSF21Q96ID5 467 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 DEFB118Q96PH6 123 aa4.8□□□□□ -1.64
SMAD4-202ENST00000398417 KCNC2Q96PR1 638 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms