RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 CD1BP29016 333 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 RAB13P51153 203 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 CRYBB1P53674 252 aaPredicted RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 MAPK12P53778 367 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 OGDHQ02218 1023 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 ILF3Q12906 894 aaKnown RBP eCLIP6.44□□□□□ -1.383e-6■■■□□ 17.1
TM9SF4-202ENST00000398022 CHI3L2Q15782 390 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF667Q5HYK9 610 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 TXNRD3NBQ6F5E7 133 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 TCEAL6Q6IPX3 200 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 FKBP9P1Q75LS8 142 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF551Q7Z340 670 aaPredicted RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 VASH2Q86V25 355 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 CMTR2Q8IYT2 770 aaKnown RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 ADGRF2Q8IZF7 708 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 BPIFCQ8NFQ6 507 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 PPP4R1Q8TF05 950 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 BORCS5Q969J3 196 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF707Q96C28 371 aaPredicted RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 KIF12Q96FN5 646 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 PDXPQ96GD0 296 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 OSMRQ99650 979 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 THTPAQ9BU02 230 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 NMUR2Q9GZQ4 415 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 METTL9Q9H1A3 318 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 FOLH1BQ9HBA9 442 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 RAB6BQ9NRW1 208 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 POMT1Q9Y6A1 747 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 ZFHX4Q86UP3 3567 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 FAM237BA0A1B0GVD1 139 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF729A6NN14 1252 aaPredicted RBP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 C12orf71A8MTZ7 269 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 ITGB1BP1O14713 200 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 PTNP21246 168 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 DDX6P26196 483 aaKnown RBP eCLIP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 CAPGP40121 348 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 CDKN2CP42773 168 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 ETV4P43268 484 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 ALDH3B2P48448 385 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 SLC11A2P49281 568 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 ANGEL2Q5VTE6 544 aaKnown RBP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 TRILQ7L0X0 811 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 KBTBD2Q8IY47 623 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 CENPSQ8N2Z9 138 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 MZB1Q8WU39 189 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 CNPPD1Q9BV87 410 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 OR2B2Q9GZK3 357 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 GPAMQ9HCL2 828 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 ARMCX1Q9P291 453 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 NXF1Q9UBU9 619 aaKnown RBP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 IL20RAQ9UHF4 553 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 SARDHQ9UL12 918 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 ATXN7L1Q9ULK2 861 aaPredicted RBP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 PTPRJQ12913 1337 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF716A6NP11 495 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 TSPAN4O14817 238 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 CSDE1O75534 798 aaKnown RBP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 TM7SF2O76062 418 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 SORBS2O94875 1100 aaKnown RBP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 CRYGCP07315 174 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 ADH1AP07327 375 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF735P0CB33 412 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 RBL1P28749 1068 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 SLC25A11Q02978 314 aaKnown RBP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 BST1Q10588 318 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 NPRL3Q12980 569 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 SLAQ13239 276 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 MTM1Q13496 603 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 POU4F3Q15319 338 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 SLC5A12Q1EHB4 618 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 KLHL12Q53G59 568 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 TMEM240Q5SV17 173 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 ABHD15Q6UXT9 468 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 DDX53Q86TM3 631 aaKnown RBP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 IQCHQ86VS3 1027 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 POU5F2Q8N7G0 328 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 RTL3Q8N8U3 475 aaKnown RBP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 PAQR8Q8TEZ7 354 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 AUTS2Q8WXX7 1259 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 TPD52L3Q96J77 140 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF251Q9BRH9 671 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 GSDMCQ9BYG8 508 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 FBXO34Q9NWN3 711 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 KANSL3Q9P2N6 904 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 CA14Q9ULX7 337 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 AAR2Q9Y312 384 aaKnown RBP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 PCM1Q15154 2024 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 CNTNAP2Q9UHC6 1331 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 PLK4O00444 970 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 CCNT2O60583 730 aaKnown RBP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 PIAS1O75925 651 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 WDPCPO95876 746 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 DDCP20711 480 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 CRABP1P29762 137 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 MIPP30301 263 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF157P51786 506 aaPredicted RBP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 BMXP51813 675 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 AQP5P55064 265 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 TLE2Q04725 743 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms