RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 GKP32189 559 aa15.29■□□□□ 0.04
HOXA3-202ENST00000396352 RPS3AP61247 264 aaKnown RBP15.29■□□□□ 0.04
HOXA3-202ENST00000396352 CD300CQ08708 224 aa15.29■□□□□ 0.04
HOXA3-202ENST00000396352 PGS1Q32NB8 556 aa15.29■□□□□ 0.04
HOXA3-202ENST00000396352 TTLL9Q3SXZ7 439 aa15.29■□□□□ 0.04
HOXA3-202ENST00000396352 SYT6Q5T7P8 510 aaPredicted RBP15.29■□□□□ 0.04
HOXA3-202ENST00000396352 SNX29P2Q8IUI4 249 aa15.29■□□□□ 0.04
HOXA3-202ENST00000396352 EGLN2Q96KS0 407 aa15.29■□□□□ 0.04
HOXA3-202ENST00000396352 C19orf43Q9BQ61 176 aa15.29■□□□□ 0.04
HOXA3-202ENST00000396352 SLC32A1Q9H598 525 aa15.29■□□□□ 0.04
HOXA3-202ENST00000396352 ATP13A3Q9H7F0 1226 aa15.29■□□□□ 0.04
HOXA3-202ENST00000396352 PAIP2BQ9ULR5 123 aaKnown RBP15.29■□□□□ 0.04
HOXA3-202ENST00000396352 HSPE1-MOB4S4R3N1 261 aa15.29■□□□□ 0.04
HOXA3-202ENST00000396352 GALTP07902 379 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 PRPS2P11908 318 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 PRKAR2AP13861 404 aaKnown RBP15.28■□□□□ 0.04
HOXA3-202ENST00000396352 PRPH2P23942 346 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 FCGRTP55899 365 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 VBP1P61758 197 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 LYPLAL1Q5VWZ2 237 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 SLC8B1Q6J4K2 584 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 SERPINA11Q86U17 422 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 RNF168Q8IYW5 571 aaPredicted RBP15.28■□□□□ 0.04
HOXA3-202ENST00000396352 NXPE1Q8N323 547 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 SELENOMQ8WWX9 145 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 TM9SF3Q9HD45 589 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 FBXO8Q9NRD0 319 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 THG1LQ9NWX6 298 aaKnown RBP15.28■□□□□ 0.04
HOXA3-202ENST00000396352 SEC24AO95486 1093 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 ANXA5P08758 320 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 RXRGP48443 463 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 CXCR4P61073 352 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 ELAVL2Q12926 359 aaKnown RBP15.28■□□□□ 0.04
HOXA3-202ENST00000396352 SMN1Q16637 294 aaKnown RBP15.28■□□□□ 0.04
HOXA3-202ENST00000396352 DYNC2LI1Q8TCX1 351 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 ELAC1Q9H777 363 aaKnown RBP15.28■□□□□ 0.04
HOXA3-202ENST00000396352 PCDHB7Q9Y5E2 793 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 TMEM247A6NEH6 219 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 RFXANKO14593 260 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 LRATO95237 230 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 EPHA2P29317 976 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 RPIAP49247 311 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 LSM3P62310 102 aaKnown RBP15.28■□□□□ 0.04
HOXA3-202ENST00000396352 GTF2H3Q13889 308 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 CLCA4Q14CN2 919 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 GGTA1PQ4G0N0 100 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 PERM1Q5SV97 790 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 GALNT10Q86SR1 603 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 S100ZQ8WXG8 99 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 APIPQ96GX9 242 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 ARL15Q9NXU5 204 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 TRPM5Q9NZQ8 1165 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 NDRG4Q9ULP0 352 aaKnown RBP15.28■□□□□ 0.04
HOXA3-202ENST00000396352 TPRKBQ9Y3C4 175 aa15.28■□□□□ 0.04
HOXA3-202ENST00000396352 DIRAS1O95057 198 aa15.27■□□□□ 0.04
HOXA3-202ENST00000396352 MT-ND2P03891 347 aa15.27■□□□□ 0.04
HOXA3-202ENST00000396352 BMP4P12644 408 aa15.27■□□□□ 0.04
HOXA3-202ENST00000396352 OR1D2P34982 312 aa15.27■□□□□ 0.04
HOXA3-202ENST00000396352 TUFMP49411 452 aaKnown RBP15.27■□□□□ 0.04
HOXA3-202ENST00000396352 HNRNPFP52597 415 aaKnown RBP15.27■□□□□ 0.04
HOXA3-202ENST00000396352 VLDLRP98155 873 aa15.27■□□□□ 0.04
HOXA3-202ENST00000396352 OR4F3Q6IEY1 312 aa15.27■□□□□ 0.04
HOXA3-202ENST00000396352 P2RY8Q86VZ1 359 aa15.27■□□□□ 0.04
HOXA3-202ENST00000396352 ZSWIM9Q86XI8 627 aa15.27■□□□□ 0.04
HOXA3-202ENST00000396352 PGBD3Q8N328 593 aa15.27■□□□□ 0.04
HOXA3-202ENST00000396352 GLMNQ92990 594 aa15.27■□□□□ 0.04
HOXA3-202ENST00000396352 ITPKCQ96DU7 683 aa15.27■□□□□ 0.04
HOXA3-202ENST00000396352 MYOCQ99972 504 aa15.27■□□□□ 0.04
HOXA3-202ENST00000396352 AASDHPPTQ9NRN7 309 aa15.27■□□□□ 0.04
HOXA3-202ENST00000396352 AGAP14A8MT82 685 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 A8MX80 341 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 hCG_2039718K7EN88 272 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 NADKO95544 446 aaPredicted RBP15.27■□□□□ 0.03
HOXA3-202ENST00000396352 SPAM1P38567 509 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 CAP1Q01518 475 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 BOP1Q14137 746 aaKnown RBP15.27■□□□□ 0.03
HOXA3-202ENST00000396352 GPR33Q49SQ1 333 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 TPGS1Q6ZTW0 290 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 TSPAN33Q86UF1 283 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 CCDC71Q8IV32 467 aaPredicted RBP15.27■□□□□ 0.03
HOXA3-202ENST00000396352 APCDD1Q8J025 514 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 DCAF4L2Q8NA75 395 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 CMTM7Q96FZ5 175 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 GMPPBQ9Y5P6 360 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 CASP8AP2Q9UKL3 1982 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 MYO1GB0I1T2 1018 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 M0R3G1 203 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 CBSLP0DN79 551 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 ELNP15502 786 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 CBSP35520 551 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 IL1RL1Q01638 556 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 BCL2L1Q07817 233 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 MTAPQ13126 283 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 TMEM236Q5W0B7 351 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 GPR155Q7Z3F1 870 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 VTCN1Q7Z7D3 282 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 ZZZ3Q8IYH5 903 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 ELMOD1Q8N336 334 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 GPR26Q8NDV2 337 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 ELOVL6Q9H5J4 265 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms