RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 MENTQ9BUN1 341 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 THAP2Q9H0W7 228 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 ZNF304Q9HCX3 659 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 SCINQ9Y6U3 715 aa12.98□□□□□ -0.33
VCPKMT-201ENST00000395859 GOLGA6L19H0YKK7 550 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 BUD23O43709 281 aaKnown RBP12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 NEURL1O76050 574 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 EPOP01588 193 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 FTLP02792 175 aaPredicted RBP12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 TPM2P07951 284 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 ICAM2P13598 275 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 EEF1DP29692 281 aaKnown RBP12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 PTGER1P34995 402 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 EMP2P54851 167 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 AP2B1P63010 937 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 XIAPP98170 497 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 PIGHQ14442 188 aaPredicted RBP12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 OR1C1Q15619 314 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 FAM214AQ32MH5 1076 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 EMC4Q5J8M3 183 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 SIRPB2Q5JXA9 342 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 ACER2Q5QJU3 275 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 TMEM211Q6ICI0 200 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 SPINK14Q6IE38 97 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 PRMT9Q6P2P2 845 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 CD163Q86VB7 1156 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 ZZZ3Q8IYH5 903 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 CLYBLQ8N0X4 340 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 CCNYQ8ND76 341 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 SEC16BQ96JE7 1060 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 PDLIM2Q96JY6 352 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 KLHL1Q9NR64 748 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 HACD3Q9P035 362 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 EDARQ9UNE0 448 aa12.97□□□□□ -0.33
VCPKMT-201ENST00000395859 IGLV3-16A0A075B6K0 115 aa12.96□□□□□ -0.33
VCPKMT-201ENST00000395859 TPM3P06753 285 aa12.96□□□□□ -0.33
VCPKMT-201ENST00000395859 FERP16591 822 aa12.96□□□□□ -0.33
VCPKMT-201ENST00000395859 CHRNA4P43681 627 aa12.96□□□□□ -0.33
VCPKMT-201ENST00000395859 KRT31Q15323 416 aa12.96□□□□□ -0.33
VCPKMT-201ENST00000395859 GALNTL5Q7Z4T8 443 aa12.96□□□□□ -0.33
VCPKMT-201ENST00000395859 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.96□□□□□ -0.33
VCPKMT-201ENST00000395859 TMTC1Q8IUR5 882 aa12.96□□□□□ -0.33
VCPKMT-201ENST00000395859 LINC01555Q8NAE3 123 aa12.96□□□□□ -0.33
VCPKMT-201ENST00000395859 ACRBPQ8NEB7 543 aa12.96□□□□□ -0.33
VCPKMT-201ENST00000395859 ENOX1Q8TC92 643 aaKnown RBP12.96□□□□□ -0.33
VCPKMT-201ENST00000395859 RND1Q92730 232 aa12.96□□□□□ -0.33
VCPKMT-201ENST00000395859 TGIF2Q9GZN2 237 aa12.96□□□□□ -0.33
VCPKMT-201ENST00000395859 GLOD4Q9HC38 313 aa12.96□□□□□ -0.33
VCPKMT-201ENST00000395859 LUC7LQ9NQ29 371 aaKnown RBP12.96□□□□□ -0.33
VCPKMT-201ENST00000395859 TEKT2Q9UIF3 430 aa12.96□□□□□ -0.33
VCPKMT-201ENST00000395859 ZNF407Q9C0G0 2248 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 CTSVO60911 334 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 SRP72O76094 671 aaKnown RBP12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 RAF1P04049 648 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 ATP1B2P14415 290 aaPredicted RBP12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 CXCR2P25025 360 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 CD68P34810 354 aaPredicted RBP12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 PTGS2P35354 604 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 GRIA3P42263 894 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 CDKAL1Q5VV42 579 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 CCDC70Q6NSX1 233 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 CHSY3Q70JA7 882 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 GLT6D1Q7Z4J2 308 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 PHC2Q8IXK0 858 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 TBC1D21Q8IYX1 336 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 PLD5Q8N7P1 536 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 TTC29Q8NA56 475 aaPredicted RBP12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 TMEM178AQ8NBL3 297 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 BTBD6Q96KE9 485 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 MRGPRX2Q96LB1 330 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 C10orf90Q96M02 699 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 OLFM3Q96PB7 478 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 OLFM1Q99784 485 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 TUBB6Q9BUF5 446 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 ASB8Q9H765 288 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 MRPL47Q9HD33 250 aaKnown RBP12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 PLSCR2Q9NRY7 297 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 GNPTGQ9UJJ9 305 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 PKP3Q9Y446 797 aa12.95□□□□□ -0.34
VCPKMT-201ENST00000395859 A0A1B0GTH9 108 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 HYKKA2RU49 373 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 RCCD1A6NED2 376 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 ISM1B1AKI9 464 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 INAFM1C9JVW0 142 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 DDX3XO00571 662 aaKnown RBP eCLIP12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 MAN1A2O60476 641 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 SP1P08047 785 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 ZNF24P17028 368 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 PKLRP30613 574 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 WNT3AP56704 352 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 NUP107P57740 925 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 IQCB1Q15051 598 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 ZC3H12BQ5HYM0 836 aaKnown RBP12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 WASHC2DQ5SRD0 308 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 FIGLAQ6QHK4 219 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 ARSKQ6UWY0 536 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 CIARTQ8N365 385 aaPredicted RBP12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 AMER3Q8N944 861 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 NEK11Q8NG66 645 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 OR5K2Q8NHB8 316 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms