RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 CTSFQ9UBX1 484 aa17.27■□□□□ 0.36
CXCL12-204ENST00000395793 KLK4Q9Y5K2 254 aa17.27■□□□□ 0.36
CXCL12-204ENST00000395793 ICE1Q9Y2F5 2266 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 HIVEP3Q5T1R4 2406 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 LOC105369274A0A096LPK9 316 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 LOC102723532A0A0G2JNH3 316 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 FITM1A5D6W6 292 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 ARHGEF33A8MVX0 844 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 ALOX12BO75342 701 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 VPS4BO75351 444 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 FKBP9O95302 570 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 KRT14P02533 472 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 ERGP11308 486 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 OGNP20774 298 aaKnown RBP17.26■□□□□ 0.35
CXCL12-204ENST00000395793 ATP5DP30049 168 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 ARSFP54793 590 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 ADARP55265 1226 aaKnown RBP17.26■□□□□ 0.35
CXCL12-204ENST00000395793 VSX2P58304 361 aaPredicted RBP17.26■□□□□ 0.35
CXCL12-204ENST00000395793 MYBPC3Q14896 1274 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 NKG7Q16617 165 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 CYP2A13Q16696 494 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 ZC3H12BQ5HYM0 836 aaKnown RBP17.26■□□□□ 0.35
CXCL12-204ENST00000395793 TTC23LQ6PF05 361 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 RNF44Q7L0R7 432 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 OVCH1Q7RTY7 1134 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 SDCCAG8Q86SQ7 713 aaPredicted RBP17.26■□□□□ 0.35
CXCL12-204ENST00000395793 HPS6Q86YV9 775 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 CILP2Q8IUL8 1156 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 OR4N4Q8N0Y3 316 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 AGGF1Q8N302 714 aaeCLIP17.26■□□□□ 0.35
CXCL12-204ENST00000395793 GALNT16Q8N428 558 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 GIMAP7Q8NHV1 300 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 GSDMBQ8TAX9 411 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 INPP5DQ92835 1189 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 PNPLA2Q96AD5 504 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 FER1L6-AS2Q96M78 137 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 PSMG3-AS1Q96PY0 264 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 MESP1Q9BRJ9 268 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 ZBTB20Q9HC78 741 aaPredicted RBP17.26■□□□□ 0.35
CXCL12-204ENST00000395793 SLC6A20Q9NP91 592 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 SPATA7Q9P0W8 599 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 VPS4AQ9UN37 437 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 G3BP2Q9UN86 482 aaKnown RBP17.26■□□□□ 0.35
CXCL12-204ENST00000395793 MED16Q9Y2X0 877 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 NEU2Q9Y3R4 380 aa17.26■□□□□ 0.35
CXCL12-204ENST00000395793 SPTBN1Q01082 2364 aaKnown RBP17.25■□□□□ 0.35
CXCL12-204ENST00000395793 A0A0J9YVX5 310 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 BLACEA4D250 179 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 TARM1B6A8C7 271 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 PEX12O00623 359 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 ESR1P03372 595 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 CD63P08962 238 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 PKMP14618 531 aaKnown RBP17.25■□□□□ 0.35
CXCL12-204ENST00000395793 CCNFP41002 786 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 OR1D4P47884 311 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 GRM7Q14831 915 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 TCTE1Q5JU00 501 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 WASHC2DQ5SRD0 308 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 RNF187Q5TA31 235 aaPredicted RBP17.25■□□□□ 0.35
CXCL12-204ENST00000395793 SHISA6Q6ZSJ9 500 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 DENND6AQ8IWF6 608 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 CLEC1AQ8NC01 280 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 ZUFSPQ96AP4 578 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 ZNF669Q96BR6 464 aaPredicted RBP17.25■□□□□ 0.35
CXCL12-204ENST00000395793 TCF12Q99081 682 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 ACAT2Q9BWD1 397 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 SLC26A1Q9H2B4 701 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 HOMER3Q9NSC5 361 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 C5AR2Q9P296 337 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 STOX2Q9P2F5 926 aaPredicted RBP17.25■□□□□ 0.35
CXCL12-204ENST00000395793 HS3ST3B1Q9Y662 390 aa17.25■□□□□ 0.35
CXCL12-204ENST00000395793 UTP20O75691 2785 aaKnown RBP17.25■□□□□ 0.35
CXCL12-204ENST00000395793 ZCWPW2A0A1B0GU75 182 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 OR2A25A4D2G3 310 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 GOLGA8MH3BSY2 632 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 AGPSO00116 658 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 SOCS6O14544 535 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 PSIP1O75475 530 aaKnown RBP17.24■□□□□ 0.35
CXCL12-204ENST00000395793 RNF224P0DH78 156 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 CHRM3P20309 590 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 MMP11P24347 488 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 SOX8P57073 446 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 KLHL38Q2WGJ6 581 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 PLEKHN1Q494U1 663 aaPredicted RBP17.24■□□□□ 0.35
CXCL12-204ENST00000395793 ANKRD20A4Q4UJ75 823 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 NEPROQ6NW34 567 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 SUSD1Q6UWL2 747 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 TTC29Q8NA56 475 aaPredicted RBP17.24■□□□□ 0.35
CXCL12-204ENST00000395793 OR9A1PQ8NGU1 263 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 C19orf60Q96EN9 201 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 FOPNLQ96NB1 174 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 SOX17Q9H6I2 414 aaPredicted RBP17.24■□□□□ 0.35
CXCL12-204ENST00000395793 WDR54Q9H977 334 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 SLAMF7Q9NQ25 335 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 FBXL4Q9UKA2 621 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 MRFAP1Q9Y605 127 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 MAU2Q9Y6X3 613 aa17.24■□□□□ 0.35
CXCL12-204ENST00000395793 PRRC2CQ9Y520 2896 aaKnown RBP17.24■□□□□ 0.35
CXCL12-204ENST00000395793 IGKV1-8A0A0C4DH67 115 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 FAM237BA0A1B0GVD1 139 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms