RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 MXD1Q05195 221 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 CDK5R2Q13319 367 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 KRT33BQ14525 404 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 GANABQ14697 944 aaKnown RBP15.72■□□□□ 0.11
PCDH1-203ENST00000394536 C6orf183Q5T699 404 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 TYW3Q6IPR3 259 aaKnown RBP15.72■□□□□ 0.11
PCDH1-203ENST00000394536 AKAP14Q86UN6 197 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 OR13F1Q8NGS4 319 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 AUTS2Q8WXX7 1259 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 ARHGAP39Q9C0H5 1083 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 GABRQQ9UN88 632 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 ANKDD1BA6NHY2 528 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 LOC110117498-PIK3R3F6TDL0 507 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 LSM1O15116 133 aaKnown RBP15.72■□□□□ 0.11
PCDH1-203ENST00000394536 URODP06132 367 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 ALOX5P09917 674 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 GABRR2P28476 465 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 GTF2E2P29084 291 aaKnown RBP15.72■□□□□ 0.11
PCDH1-203ENST00000394536 DNAJA1P31689 397 aaKnown RBP15.72■□□□□ 0.11
PCDH1-203ENST00000394536 NSG1P42857 185 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 EMX1Q04741 257 aaPredicted RBP15.72■□□□□ 0.11
PCDH1-203ENST00000394536 SPATS1Q496A3 300 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 TRAF7Q6Q0C0 670 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 MRPL10Q7Z7H8 261 aaKnown RBP15.72■□□□□ 0.11
PCDH1-203ENST00000394536 TRAPPC5Q8IUR0 188 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 ELMOD1Q8N336 334 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 UBASH3BQ8TF42 649 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 KRBA1A5PL33 1030 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 KPNA3O00505 521 aaPredicted RBP15.71■□□□□ 0.11
PCDH1-203ENST00000394536 AXIN1O15169 862 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 B3GALT4O96024 378 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 LRG1P02750 347 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 TNFRSF1BP20333 461 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 HOXD9P28356 352 aaPredicted RBP15.71■□□□□ 0.11
PCDH1-203ENST00000394536 CCND3P30281 292 aaPredicted RBP15.71■□□□□ 0.11
PCDH1-203ENST00000394536 GPC1P35052 558 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 GRK3P35626 688 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 HPCAL1P37235 193 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 NKX2-5P52952 324 aaPredicted RBP15.71■□□□□ 0.11
PCDH1-203ENST00000394536 ADAM17P78536 824 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 ELP6Q0PNE2 266 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 FRG2Q64ET8 278 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 PTCHD4Q6ZW05 846 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 OR5AK3PQ8NH89 298 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 SH3YL1Q96HL8 342 aaPredicted RBP15.71■□□□□ 0.11
PCDH1-203ENST00000394536 FRG2BQ96QU4 278 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 GPRC5BQ9NZH0 403 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 CFAP97Q9P2B7 532 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 DLGAP4Q9Y2H0 992 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 C2orf78A6NCI8 922 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 PSMD11O00231 422 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 CCNDBP1O95273 360 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 RPP38P78345 283 aaKnown RBP15.71■□□□□ 0.11
PCDH1-203ENST00000394536 NUMA1Q14980 2115 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 UAP1L1Q3KQV9 507 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 SLC34A3Q8N130 599 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 MAL2Q969L2 176 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 UBE2FQ969M7 185 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 IL4I1Q96RQ9 567 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 OSBPL10Q9BXB5 764 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 FZD4Q9ULV1 537 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 DYRK1BQ9Y463 629 aa15.71■□□□□ 0.11
PCDH1-203ENST00000394536 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.71■□□□□ 0.1
PCDH1-203ENST00000394536 CCNKO75909 580 aa15.71■□□□□ 0.1
PCDH1-203ENST00000394536 PEX11BO96011 259 aa15.71■□□□□ 0.1
PCDH1-203ENST00000394536 EBLN1P0CF75 366 aa15.71■□□□□ 0.1
PCDH1-203ENST00000394536 TACR1P25103 407 aa15.71■□□□□ 0.1
PCDH1-203ENST00000394536 IHHQ14623 411 aa15.71■□□□□ 0.1
PCDH1-203ENST00000394536 CLCA4Q14CN2 919 aa15.71■□□□□ 0.1
PCDH1-203ENST00000394536 TAB1Q15750 504 aa15.71■□□□□ 0.1
PCDH1-203ENST00000394536 TYSND1Q2T9J0 566 aa15.71■□□□□ 0.1
PCDH1-203ENST00000394536 CLLU1OSQ5K130 101 aa15.71■□□□□ 0.1
PCDH1-203ENST00000394536 TSPAN33Q86UF1 283 aa15.71■□□□□ 0.1
PCDH1-203ENST00000394536 CLECL1Q8IZS7 167 aa15.71■□□□□ 0.1
PCDH1-203ENST00000394536 OR4K1Q8NGD4 311 aa15.71■□□□□ 0.1
PCDH1-203ENST00000394536 DUSP26Q9BV47 211 aa15.71■□□□□ 0.1
PCDH1-203ENST00000394536 TPT1P8Q9HAU6 139 aa15.71■□□□□ 0.1
PCDH1-203ENST00000394536 SLC25A13Q9UJS0 675 aa15.71■□□□□ 0.1
PCDH1-203ENST00000394536 CKBP12277 381 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 HOXD8P13378 290 aaPredicted RBP15.7■□□□□ 0.1
PCDH1-203ENST00000394536 PRKAG1P54619 331 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 CDC42P60953 191 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 ACOX1Q15067 660 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 LIMS2Q7Z4I7 341 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 C11orf65Q8NCR3 313 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 WDR36Q8NI36 951 aaKnown RBP15.7■□□□□ 0.1
PCDH1-203ENST00000394536 IKZF5Q9H5V7 419 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 IL17CQ9P0M4 197 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 Q9Y3F1 56 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 A8MU76 341 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 FAM155AB1AL88 458 aaPredicted RBP15.7■□□□□ 0.1
PCDH1-203ENST00000394536 PRAMEF12O95522 483 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 RAB15P59190 212 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 AP1S1P61966 158 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 ADARB1P78563 741 aaKnown RBP15.7■□□□□ 0.1
PCDH1-203ENST00000394536 RING1Q06587 406 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 TP53BP2Q13625 1128 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 SLC14A2Q15849 920 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 ARMCX4Q5H9R4 360 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 TEX26Q8N6G2 289 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms