RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 ZNF143P52747 638 aaPredicted RBP13.14□□□□□ -0.31
USP49-203ENST00000394253 SLC22A10Q63ZE4 541 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 ZFAND2BQ8WV99 257 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 TAAR8Q969N4 342 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 HDAC10Q969S8 669 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 HYLS1Q96M11 299 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 EBF3Q9H4W6 596 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 MGAT4CQ9UBM8 478 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 TET3O43151 1660 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 LIASO43766 372 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 EDF1O60869 148 aaKnown RBP13.14□□□□□ -0.31
USP49-203ENST00000394253 FMO3P31513 532 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 SERPINF1P36955 418 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 KANK2Q63ZY3 851 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 CPB2Q96IY4 423 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 SAGE1Q9NXZ1 904 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 H3BRB1 525 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 PAHP00439 452 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 BPGMP07738 259 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 KLRC2P26717 231 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 DSG2Q14126 1118 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.14□□□□□ -0.31
USP49-203ENST00000394253 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.14□□□□□ -0.31
USP49-203ENST00000394253 S100A7AQ86SG5 101 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 WNT8BQ93098 351 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 POP1Q99575 1024 aaKnown RBP13.14□□□□□ -0.31
USP49-203ENST00000394253 SVBPQ8N300 66 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 TMEM209Q96SK2 561 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 TBX22Q9Y458 520 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 ZNF670-ZNF695F2Z2N8 137 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 CXCR6O00574 342 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 DNASE1P24855 282 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 SELENOVP59797 346 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 SH3PXD2AQ5TCZ1 1133 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 TREML1Q86YW5 311 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 TAS1R2Q8TE23 839 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 CNTNAP3BQ96NU0 1288 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 ACAD8Q9UKU7 415 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 CA5BQ9Y2D0 317 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 ZNF510Q9Y2H8 683 aa13.14□□□□□ -0.31
USP49-203ENST00000394253 ALPPP05187 535 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 VSX2P58304 361 aaPredicted RBP13.13□□□□□ -0.31
USP49-203ENST00000394253 RPP30P78346 268 aaKnown RBP13.13□□□□□ -0.31
USP49-203ENST00000394253 TLE1Q04724 770 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 LCP2Q13094 533 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 MT-ND5P03915 603 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 ICAM1P05362 532 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 PKMP14618 531 aaKnown RBP13.13□□□□□ -0.31
USP49-203ENST00000394253 KCNA6P17658 529 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 NT5EP21589 574 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 PCBP1Q15365 356 aaKnown RBP eCLIP13.13□□□□□ -0.31
USP49-203ENST00000394253 LRRC37A5PQ49AS3 106 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 PXKQ7Z7A4 578 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 TCEANCQ8N8B7 351 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 STON2Q8WXE9 905 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 RUVBL1Q9Y265 456 aaKnown RBP13.13□□□□□ -0.31
USP49-203ENST00000394253 VWA7Q9Y334 891 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 NPEPPSL1A6NEC2 478 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 MEN1O00255 615 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 LCKP06239 509 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 PORP16435 677 aaPredicted RBP13.13□□□□□ -0.31
USP49-203ENST00000394253 FXYD6P3P58550 94 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 LAMTOR4Q0VGL1 99 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 COMMD7Q86VX2 200 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 TRMT2AQ8IZ69 625 aaKnown RBP13.13□□□□□ -0.31
USP49-203ENST00000394253 ARMC5Q96C12 935 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 MYRFLQ96LU7 910 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 EPYCQ99645 322 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 NMUR2Q9GZQ4 415 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 RPS10P5Q9NQ39 176 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 XPNPEP1Q9NQW7 623 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 ARHGAP20Q9P2F6 1191 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 SEPT4O43236 478 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 NOMO3P69849 1222 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 ATXN7L3Q14CW9 347 aaPredicted RBP13.13□□□□□ -0.31
USP49-203ENST00000394253 NOMO1Q15155 1222 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 LRIF1Q5T3J3 769 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 GPR157Q5UAW9 335 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 IQCHQ86VS3 1027 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 GOLM1Q8NBJ4 401 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 TSEN2Q8NCE0 465 aaKnown RBP13.13□□□□□ -0.31
USP49-203ENST00000394253 JPH3Q8WXH2 748 aaPredicted RBP13.13□□□□□ -0.31
USP49-203ENST00000394253 C2orf92A0A1B0GVN3 265 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 MAOAP21397 527 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 ICAM3P32942 547 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 MFSD13AQ14CX5 517 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 TAF1CQ15572 869 aaPredicted RBP13.13□□□□□ -0.31
USP49-203ENST00000394253 NPTX1Q15818 432 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 CDKAL1Q5VV42 579 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 MARVELD2Q8N4S9 558 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 LRTOMTQ8WZ04 291 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 MEPEQ9NQ76 525 aaPredicted RBP13.13□□□□□ -0.31
USP49-203ENST00000394253 GTF2IRD1Q9UHL9 959 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 EIF2B4Q9UI10 523 aaKnown RBP13.13□□□□□ -0.31
USP49-203ENST00000394253 USP6P35125 1406 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 TRAPPC13A5PLN9 417 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 DNAJB5O75953 348 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 CDK1P06493 297 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 BMP6P22004 513 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 CHATP28329 748 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms