RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 CPSF6Q16630 551 aaKnown RBP eCLIP8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 IL27RAQ6UWB1 636 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 ACAD11Q709F0 780 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 ARPINQ7Z6K5 226 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 CCL4L1Q8NHW4 92 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 WDR48Q8TAF3 677 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 MCUR1Q96AQ8 359 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 C7orf34Q96L11 122 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 ATP13A3Q9H7F0 1226 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 ASIC5Q9NY37 505 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 MAFFQ9ULX9 164 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 CA5BQ9Y2D0 317 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 DGKBQ9Y6T7 804 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 CACNA1EQ15878 2313 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 MMP20O60882 483 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 NEFHP12036 1026 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 C6P13671 934 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 RPIAP49247 311 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 EMP3P54852 163 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 VLDLRP98155 873 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 LIPEQ05469 1076 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 FLOT2Q14254 428 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 ZNF805Q5CZA5 627 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 ANKFN1Q8N957 763 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 OR5AR1Q8NGP9 310 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 PPP1R14CQ8TAE6 165 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 MSLNLQ96KJ4 702 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 MTERF1Q99551 399 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 TTYH1Q9H313 450 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 ALG2Q9H553 416 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 EPS8L2Q9H6S3 715 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 NCKAP5O14513 1909 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 GABRR3A8MPY1 467 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 FFAR1O14842 300 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 AKAP10O43572 662 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 ADH1AP07327 375 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 LAMP1P11279 417 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 MAGEA2P43356 314 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 YAP1P46937 504 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 TMEM115Q12893 351 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 ANKS6Q68DC2 871 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 TMEM154Q6P9G4 183 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 ERMP1Q7Z2K6 904 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 MILR1Q7Z6M3 343 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 ARHGEF39Q8N4T4 335 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 FGF11Q92914 225 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 GFM2Q969S9 779 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 PHF12Q96QT6 1004 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 SGPP1Q9BX95 441 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 C6orf106Q9H6K1 298 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 SPATS2LQ9NUQ6 558 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 CUEDC1Q9NWM3 386 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 MAN2B2Q9Y2E5 1009 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 OR1A2Q9Y585 309 aa8.17□□□□□ -1.1
GAPVD1-204ENST00000394083 SCAMP1O15126 338 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 NDUFS2O75306 463 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 ALPLP05186 524 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 TNFRSF1BP20333 461 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 SLC7A1P30825 629 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 RASSF2P50749 326 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 TRIP10Q15642 601 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 ZNF793Q6ZN11 406 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 ERN2Q76MJ5 926 aaKnown RBP8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 RBFAQ8N0V3 343 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 CIDECQ96AQ7 238 aaPredicted RBP8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 NUDT4Q9NZJ9 180 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 CROTQ9UKG9 612 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 AP4B1Q9Y6B7 739 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 K7EPI3 171 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 IFRD1O00458 451 aaPredicted RBP8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 RECQL5O94762 991 aaPredicted RBP8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 NSG1P42857 185 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 RAD51Q06609 339 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 CLCA4Q14CN2 919 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 HNRNPA1L2Q32P51 320 aaKnown RBP8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 FLYWCH1Q4VC44 716 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 RETSATQ6NUM9 610 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 NECAB2Q7Z6G3 386 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 NKAPQ8N5F7 415 aaKnown RBP8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 GLYATL1Q969I3 302 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 ANKRA2Q9H9E1 313 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 GEMIN8Q9NWZ8 242 aaKnown RBP8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 FADS3Q9Y5Q0 445 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 PHF3Q92576 2039 aaKnown RBP8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 ZBBXA8MT70 800 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 PCDH7O60245 1069 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 FOXD2O60548 495 aaPredicted RBP8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 WISP1O95388 367 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 PGRP06401 933 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 ADRB3P13945 408 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 GGT1P19440 569 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 PRKACGP22612 351 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 RPL38P63173 70 aaKnown RBP8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 GGTA1PQ4G0N0 100 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 TMEM196Q5HYL7 178 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 THEMIS2Q5TEJ8 643 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 GTF2IRD2BQ6EKJ0 949 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 VTCN1Q7Z7D3 282 aa8.16□□□□□ -1.1
GAPVD1-204ENST00000394083 GTF2IRD2Q86UP8 949 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms