RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 PARP6Q2NL67 630 aa14.68□□□□□ -0.06
CHMP3-202ENST00000393773 CCDC38Q502W7 563 aa14.68□□□□□ -0.06
CHMP3-202ENST00000393773 UNC5DQ6UXZ4 953 aa14.68□□□□□ -0.06
CHMP3-202ENST00000393773 OR1N1Q8NGS0 311 aa14.68□□□□□ -0.06
CHMP3-202ENST00000393773 STT3BQ8TCJ2 826 aa14.68□□□□□ -0.06
CHMP3-202ENST00000393773 PSMF1Q92530 271 aa14.68□□□□□ -0.06
CHMP3-202ENST00000393773 ALG3Q92685 438 aa14.68□□□□□ -0.06
CHMP3-202ENST00000393773 C8orf44Q96CB5 159 aa14.68□□□□□ -0.06
CHMP3-202ENST00000393773 VPS50Q96JG6 964 aa14.68□□□□□ -0.06
CHMP3-202ENST00000393773 IL1RAPL1Q9NZN1 696 aa14.68□□□□□ -0.06
CHMP3-202ENST00000393773 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.68□□□□□ -0.06
CHMP3-202ENST00000393773 KLK4Q9Y5K2 254 aa14.68□□□□□ -0.06
CHMP3-202ENST00000393773 IGLV3-12A0A075B6K2 115 aa14.67□□□□□ -0.06
CHMP3-202ENST00000393773 ZNF189O75820 626 aaPredicted RBP14.67□□□□□ -0.06
CHMP3-202ENST00000393773 USP1O94782 785 aa14.67□□□□□ -0.06
CHMP3-202ENST00000393773 RPN2P04844 631 aa14.67□□□□□ -0.06
CHMP3-202ENST00000393773 ZGLP1P0C6A0 271 aa14.67□□□□□ -0.06
CHMP3-202ENST00000393773 PRR35P0CG20 571 aa14.67□□□□□ -0.06
CHMP3-202ENST00000393773 PTGER4P35408 488 aa14.67□□□□□ -0.06
CHMP3-202ENST00000393773 ARG2P78540 354 aa14.67□□□□□ -0.06
CHMP3-202ENST00000393773 HSPA14Q0VDF9 509 aa14.67□□□□□ -0.06
CHMP3-202ENST00000393773 SEMA3AQ14563 771 aa14.67□□□□□ -0.06
CHMP3-202ENST00000393773 ATG9BQ674R7 924 aa14.67□□□□□ -0.06
CHMP3-202ENST00000393773 FRMPD2BQ6IN97 320 aa14.67□□□□□ -0.06
CHMP3-202ENST00000393773 AFTPHQ6ULP2 937 aa14.67□□□□□ -0.06
CHMP3-202ENST00000393773 ZNF534Q76KX8 674 aa14.67□□□□□ -0.06
CHMP3-202ENST00000393773 RNF44Q7L0R7 432 aa14.67□□□□□ -0.06
CHMP3-202ENST00000393773 FAM71DQ8N9W8 422 aa14.67□□□□□ -0.06
CHMP3-202ENST00000393773 BRIX1Q8TDN6 353 aaKnown RBP14.67□□□□□ -0.06
CHMP3-202ENST00000393773 CCDC120Q96HB5 630 aa14.67□□□□□ -0.06
CHMP3-202ENST00000393773 MAGEB10Q96LZ2 347 aaPredicted RBP14.67□□□□□ -0.06
CHMP3-202ENST00000393773 C10orf90Q96M02 699 aa14.67□□□□□ -0.06
CHMP3-202ENST00000393773 MRPS2Q9Y399 296 aaKnown RBP14.67□□□□□ -0.06
CHMP3-202ENST00000393773 MED13LQ71F56 2210 aa14.67□□□□□ -0.06
CHMP3-202ENST00000393773 TRAV17A0A0B4J275 112 aa14.66□□□□□ -0.06
CHMP3-202ENST00000393773 KRT87PA6NCN2 255 aa14.66□□□□□ -0.06
CHMP3-202ENST00000393773 TARM1B6A8C7 271 aa14.66□□□□□ -0.06
CHMP3-202ENST00000393773 AKR1B15C9JRZ8 316 aaPredicted RBP14.66□□□□□ -0.06
CHMP3-202ENST00000393773 FKBP9O95302 570 aa14.66□□□□□ -0.06
CHMP3-202ENST00000393773 GOT2P00505 430 aaKnown RBP14.66□□□□□ -0.06
CHMP3-202ENST00000393773 VSX2P58304 361 aaPredicted RBP14.66□□□□□ -0.06
CHMP3-202ENST00000393773 ACVR1Q04771 509 aa14.66□□□□□ -0.06
CHMP3-202ENST00000393773 SF1Q15637 639 aaKnown RBP14.66□□□□□ -0.06
CHMP3-202ENST00000393773 P3H1Q32P28 736 aa14.66□□□□□ -0.06
CHMP3-202ENST00000393773 BNC2Q6ZN30 1099 aaPredicted RBP14.66□□□□□ -0.06
CHMP3-202ENST00000393773 GDF7Q7Z4P5 450 aa14.66□□□□□ -0.06
CHMP3-202ENST00000393773 KBTBD2Q8IY47 623 aa14.66□□□□□ -0.06
CHMP3-202ENST00000393773 PRSS58Q8IYP2 241 aa14.66□□□□□ -0.06
CHMP3-202ENST00000393773 MIEF2Q96C03 454 aa14.66□□□□□ -0.06
CHMP3-202ENST00000393773 ALS2CR12Q96Q35 445 aa14.66□□□□□ -0.06
CHMP3-202ENST00000393773 RAB11FIP5Q9BXF6 653 aa14.66□□□□□ -0.06
CHMP3-202ENST00000393773 ZNF304Q9HCX3 659 aa14.66□□□□□ -0.06
CHMP3-202ENST00000393773 PTGFRNQ9P2B2 879 aa14.66□□□□□ -0.06
CHMP3-202ENST00000393773 ZNF282Q9UDV7 671 aaPredicted RBP14.66□□□□□ -0.06
CHMP3-202ENST00000393773 SLC2A6Q9UGQ3 507 aa14.66□□□□□ -0.06
CHMP3-202ENST00000393773 C3orf18Q9UK00 162 aa14.66□□□□□ -0.06
CHMP3-202ENST00000393773 PCDHA13Q9Y5I0 950 aa14.66□□□□□ -0.06
CHMP3-202ENST00000393773 FAM169AQ9Y6X4 670 aa14.66□□□□□ -0.06
CHMP3-202ENST00000393773 NSG1A0A0A6YYJ2 146 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 DYTNA2CJ06 578 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 HYKKA2RU49 373 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 RCCD1A6NED2 376 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 IQCF5A8MTL0 148 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 TJP3O95049 919 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 CELA2AP08217 269 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 FDXRP22570 491 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 AOAHP28039 575 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 RWDD2BP57060 319 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 FAM214AQ32MH5 1076 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 CCSMST1Q4G0I0 132 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 WASHC2DQ5SRD0 308 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 PRMT9Q6P2P2 845 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 ZNF808Q8N4W9 903 aaPredicted RBP14.65□□□□□ -0.06
CHMP3-202ENST00000393773 SIRT6Q8N6T7 355 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 TC2NQ8N9U0 490 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 OR2L3Q8NG85 312 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 OR52K1Q8NGK4 314 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 CFAP61Q8NHU2 1237 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 HMGCLL1Q8TB92 370 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 ASZ1Q8WWH4 475 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 HDAC10Q969S8 669 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 ZUFSPQ96AP4 578 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 LURAP1Q96LR2 239 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 ZNF778Q96MU6 729 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 CARD6Q9BX69 1037 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 TRIM8Q9BZR9 551 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 RUBCNLQ9H714 662 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 SYNPO2LQ9H987 977 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 PLA2G3Q9NZ20 509 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 ABI3Q9P2A4 366 aa14.65□□□□□ -0.06
CHMP3-202ENST00000393773 LOC105369274A0A096LPK9 316 aa14.64□□□□□ -0.07
CHMP3-202ENST00000393773 IGHV1-45A0A0A0MS14 117 aa14.64□□□□□ -0.07
CHMP3-202ENST00000393773 LOC102723532A0A0G2JNH3 316 aa14.64□□□□□ -0.07
CHMP3-202ENST00000393773 F8W8V4 182 aa14.64□□□□□ -0.07
CHMP3-202ENST00000393773 SRPX2O60687 465 aaPredicted RBP14.64□□□□□ -0.07
CHMP3-202ENST00000393773 SLCO2B1O94956 709 aa14.64□□□□□ -0.07
CHMP3-202ENST00000393773 SERPINA7P05543 415 aa14.64□□□□□ -0.07
CHMP3-202ENST00000393773 FBLP22087 321 aaKnown RBP14.64□□□□□ -0.07
CHMP3-202ENST00000393773 MST1P26927 711 aa14.64□□□□□ -0.07
CHMP3-202ENST00000393773 CA7P43166 264 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms