RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 LATO43561 262 aa17.12■□□□□ 0.33
SHTN1-203ENST00000392901 PEX2P28328 305 aa17.12■□□□□ 0.33
SHTN1-203ENST00000392901 IGFALSP35858 605 aa17.12■□□□□ 0.33
SHTN1-203ENST00000392901 PPP2CBP62714 309 aa17.12■□□□□ 0.33
SHTN1-203ENST00000392901 PPP2CAP67775 309 aa17.12■□□□□ 0.33
SHTN1-203ENST00000392901 DDX39BQ13838 428 aaKnown RBP17.12■□□□□ 0.33
SHTN1-203ENST00000392901 NFYCQ13952 458 aa17.12■□□□□ 0.33
SHTN1-203ENST00000392901 SAMD4BQ5PRF9 694 aaKnown RBP17.12■□□□□ 0.33
SHTN1-203ENST00000392901 CAPN13Q6MZZ7 669 aaPredicted RBP17.12■□□□□ 0.33
SHTN1-203ENST00000392901 SUSD1Q6UWL2 747 aa17.12■□□□□ 0.33
SHTN1-203ENST00000392901 PDZD3Q86UT5 571 aa17.12■□□□□ 0.33
SHTN1-203ENST00000392901 ZFAND4Q86XD8 727 aa17.12■□□□□ 0.33
SHTN1-203ENST00000392901 MINDY1Q8N5J2 469 aa17.12■□□□□ 0.33
SHTN1-203ENST00000392901 TFGQ92734 400 aaPredicted RBP17.12■□□□□ 0.33
SHTN1-203ENST00000392901 HOPXQ9BPY8 73 aaPredicted RBP17.12■□□□□ 0.33
SHTN1-203ENST00000392901 GID8Q9NWU2 228 aa17.12■□□□□ 0.33
SHTN1-203ENST00000392901 SLAMF8Q9P0V8 285 aa17.12■□□□□ 0.33
SHTN1-203ENST00000392901 BCAP29Q9UHQ4 241 aa17.12■□□□□ 0.33
SHTN1-203ENST00000392901 TDRKHQ9Y2W6 561 aaKnown RBP17.12■□□□□ 0.33
SHTN1-203ENST00000392901 KCNE2Q9Y6J6 123 aa17.12■□□□□ 0.33
SHTN1-203ENST00000392901 TRIOBPQ9H2D6 2365 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 EIF4E1BA6NMX2 242 aaKnown RBP17.11■□□□□ 0.33
SHTN1-203ENST00000392901 ANKRD28O15084 1053 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 MYCLP1P12525 358 aaPredicted RBP17.11■□□□□ 0.33
SHTN1-203ENST00000392901 ACP5P13686 325 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 VARSP26640 1264 aaKnown RBP17.11■□□□□ 0.33
SHTN1-203ENST00000392901 CLNS1AP54105 237 aaKnown RBP17.11■□□□□ 0.33
SHTN1-203ENST00000392901 RPA4Q13156 261 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 TLR1Q15399 786 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 TMEM31Q5JXX7 168 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 C6orf10Q5SRN2 563 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 CACHD1Q5VU97 1274 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 METRNLQ641Q3 311 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 SLC15A3Q8IY34 581 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 PLCD3Q8N3E9 789 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 C2orf73Q8N5S3 287 aaPredicted RBP17.11■□□□□ 0.33
SHTN1-203ENST00000392901 FAM3CQ92520 227 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 NEIL2Q969S2 332 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 IL17FQ96PD4 163 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 MTERF1Q99551 399 aaKnown RBP17.11■□□□□ 0.33
SHTN1-203ENST00000392901 C1QTNF7Q9BXJ2 289 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 MRPL40Q9NQ50 206 aaKnown RBP17.11■□□□□ 0.33
SHTN1-203ENST00000392901 CMTM6Q9NX76 183 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 SCML1Q9UN30 329 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 UGDHO60701 494 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 SLC6A2P23975 617 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 DGKQP52824 942 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 SMAD4Q13485 552 aaKnown RBP17.11■□□□□ 0.33
SHTN1-203ENST00000392901 KIAA0040Q15053 153 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 TRIP10Q15642 601 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 COQ5Q5HYK3 327 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 UNC5DQ6UXZ4 953 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 CYP2R1Q6VVX0 501 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 TMPRSS11BQ86T26 416 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 CLHC1Q8NHS4 586 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 MAGEB10Q96LZ2 347 aaPredicted RBP17.11■□□□□ 0.33
SHTN1-203ENST00000392901 ECSITQ9BQ95 431 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 OSGEPL1Q9H4B0 414 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 UBE2ZQ9H832 354 aaPredicted RBP17.11■□□□□ 0.33
SHTN1-203ENST00000392901 PREBQ9HCU5 417 aa17.11■□□□□ 0.33
SHTN1-203ENST00000392901 LEF1Q9UJU2 399 aaPredicted RBP17.11■□□□□ 0.33
SHTN1-203ENST00000392901 NDRG2Q9UN36 371 aaKnown RBP17.11■□□□□ 0.33
SHTN1-203ENST00000392901 DNMT3AQ9Y6K1 912 aaPredicted RBP17.11■□□□□ 0.33
SHTN1-203ENST00000392901 EEDO75530 441 aaKnown RBP17.1■□□□□ 0.33
SHTN1-203ENST00000392901 NDUFV2P19404 249 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 TEAD1P28347 426 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 TAP2Q03519 686 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 SMU1Q2TAY7 513 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 MAP7D1Q3KQU3 841 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 SLC2A7Q6PXP3 512 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 KLHDC8AQ8IYD2 350 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 PQLC1Q8N2U9 271 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 OXR1Q8N573 874 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 FLCNQ8NFG4 579 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 DNAJB14Q8TBM8 379 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 RAD51AP1Q96B01 352 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 APIPQ96GX9 242 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 DPY30Q9C005 99 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 SGK2Q9HBY8 427 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 ITM2CQ9NQX7 267 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 ABCD2Q9UBJ2 740 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 FZD4Q9ULV1 537 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 COL4A2P08572 1712 aa17.1■□□□□ 0.33
SHTN1-203ENST00000392901 TCRBV21S2A2A0A5A6 115 aa17.09■□□□□ 0.33
SHTN1-203ENST00000392901 SHISA7A6NL88 538 aa17.09■□□□□ 0.33
SHTN1-203ENST00000392901 IFRD1O00458 451 aaPredicted RBP17.09■□□□□ 0.33
SHTN1-203ENST00000392901 SCAMP1O15126 338 aa17.09■□□□□ 0.33
SHTN1-203ENST00000392901 BCKDHAP12694 445 aa17.09■□□□□ 0.33
SHTN1-203ENST00000392901 NPPBP16860 134 aa17.09■□□□□ 0.33
SHTN1-203ENST00000392901 JAK1P23458 1154 aa17.09■□□□□ 0.33
SHTN1-203ENST00000392901 ACSL1P33121 698 aa17.09■□□□□ 0.33
SHTN1-203ENST00000392901 CLCNKAP51800 687 aa17.09■□□□□ 0.33
SHTN1-203ENST00000392901 PNLIPRP1P54315 467 aa17.09■□□□□ 0.33
SHTN1-203ENST00000392901 PLIN5Q00G26 463 aa17.09■□□□□ 0.33
SHTN1-203ENST00000392901 USP39Q53GS9 565 aaKnown RBP17.09■□□□□ 0.33
SHTN1-203ENST00000392901 SFT2D3Q587I9 215 aa17.09■□□□□ 0.33
SHTN1-203ENST00000392901 EOGTQ5NDL2 527 aa17.09■□□□□ 0.33
SHTN1-203ENST00000392901 CATSPEREQ5SY80 951 aa17.09■□□□□ 0.33
SHTN1-203ENST00000392901 THEMIS2Q5TEJ8 643 aa17.09■□□□□ 0.33
SHTN1-203ENST00000392901 GRHL2Q6ISB3 625 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms