RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 FAM46CQ5VWP2 391 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 DENND1CQ8IV53 801 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 KCNC2Q96PR1 638 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 SMURF2Q9HAU4 748 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 TLR4O00206 839 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 PLD2O14939 933 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 PDPK1O15530 556 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 SPAM1P38567 509 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 RGS8P57771 180 aaPredicted RBP19.24■□□□□ 0.67
SHANK1-203ENST00000391813 GRIK2Q13002 908 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 RNF44Q7L0R7 432 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 ABHD11Q8NFV4 315 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 RNASE11Q8TAA1 199 aaKnown RBP19.24■□□□□ 0.67
SHANK1-203ENST00000391813 ZNF296Q8WUU4 475 aaPredicted RBP19.24■□□□□ 0.67
SHANK1-203ENST00000391813 SNX33Q8WV41 574 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 RAD51AP1Q96B01 352 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 AP2M1Q96CW1 435 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 TMEM74Q96NL1 305 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 HEPHQ9BQS7 1158 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 FUNDC2Q9BWH2 189 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 BCAS3Q9H6U6 928 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 CD93Q9NPY3 652 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 SLC35C2Q9NQQ7 365 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 PAQR5Q9NXK6 330 aaPredicted RBP19.24■□□□□ 0.67
SHANK1-203ENST00000391813 CALML5Q9NZT1 146 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 MAP10Q9P2G4 905 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 INMT-MINDY4F8WBC2 141 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 MSI1O43347 362 aaKnown RBP19.23■□□□□ 0.67
SHANK1-203ENST00000391813 ENTPD6O75354 484 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 OR2B3O76000 313 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 ARFIP1P53367 373 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 ZNF33AQ06730 810 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 ANKDD1AQ495B1 522 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 HSD17B12Q53GQ0 312 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 AKAP1Q92667 903 aaKnown RBP eCLIP19.23■□□□□ 0.67
SHANK1-203ENST00000391813 ESAMQ96AP7 390 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 CCDC115Q96NT0 180 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 HAPLN3Q96S86 360 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 MAGEH1Q9H213 219 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 PSAT1Q9Y617 370 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 ARL5CA6NH57 179 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 ZSCAN5BA6NJL1 495 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 SOCS7O14512 581 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 CD247P20963 164 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 UFM1P61960 85 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 EMX2Q04743 252 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 PAQR3Q6TCH7 311 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 SERPINA13PQ6UXR4 307 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 TAC4Q86UU9 113 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 SLC51AQ86UW1 340 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 KLHL36Q8N4N3 616 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 ADAMTS15Q8TE58 950 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 GAB3Q8WWW8 586 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 GEMIN6Q8WXD5 167 aaKnown RBP19.23■□□□□ 0.67
SHANK1-203ENST00000391813 MGME1Q9BQP7 344 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 CHIAQ9BZP6 476 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 FLRT1Q9NZU1 646 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 CKLFQ9UBR5 152 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 PLCL2Q9UPR0 1127 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 ZNF780BQ9Y6R6 833 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 L7N2F9 121 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 PDCD5O14737 125 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 CHRM5P08912 532 aaPredicted RBP19.23■□□□□ 0.67
SHANK1-203ENST00000391813 PIK3CBP42338 1070 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 TXNL4AP83876 142 aaKnown RBP19.23■□□□□ 0.67
SHANK1-203ENST00000391813 PPP1R8Q12972 351 aaKnown RBP19.23■□□□□ 0.67
SHANK1-203ENST00000391813 ZNF267Q14586 743 aaPredicted RBP19.23■□□□□ 0.67
SHANK1-203ENST00000391813 MED27Q6P2C8 311 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 DCDC5Q6ZRR9 648 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 RBM23Q86U06 439 aaKnown RBP19.23■□□□□ 0.67
SHANK1-203ENST00000391813 AMIGO1Q86WK6 493 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 C17orf64Q86WR6 236 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 LINC00471Q8N535 108 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 FKBP14Q9NWM8 211 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 THUMPD1Q9NXG2 353 aaKnown RBP19.23■□□□□ 0.67
SHANK1-203ENST00000391813 HSPE1-MOB4S4R3N1 261 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 NHSL1Q5SYE7 1610 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 FOXD2O60548 495 aaPredicted RBP19.23■□□□□ 0.67
SHANK1-203ENST00000391813 CDRT1O95170 752 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 C8GP07360 202 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 XKP51811 444 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 DGKQP52824 942 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 ATXN1P54253 815 aaKnown RBP19.23■□□□□ 0.67
SHANK1-203ENST00000391813 TARDBPQ13148 414 aaKnown RBP eCLIP19.23■□□□□ 0.67
SHANK1-203ENST00000391813 TAF1AQ15573 450 aaPredicted RBP19.23■□□□□ 0.67
SHANK1-203ENST00000391813 TMEM236Q5W0B7 351 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 TMPRSS11BQ86T26 416 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 SIAH1Q8IUQ4 282 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 CEP76Q8TAP6 659 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 LRRC15Q8TF66 581 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 EMID1Q96A84 441 aaPredicted RBP19.23■□□□□ 0.67
SHANK1-203ENST00000391813 MOCS1Q9NZB8 636 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 B3GNT3Q9Y2A9 372 aa19.23■□□□□ 0.67
SHANK1-203ENST00000391813 CHURC1-FNTBB4DL54 471 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 LDOC1O95751 146 aaPredicted RBP19.22■□□□□ 0.67
SHANK1-203ENST00000391813 LARS2Q15031 903 aaKnown RBP19.22■□□□□ 0.67
SHANK1-203ENST00000391813 C9orf64Q5T6V5 341 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 HLA-DQA1Q5Y7H0 255 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 BPIFB1Q8TDL5 484 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 MCMBPQ9BTE3 642 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms