RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 TEX28O15482 410 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 NDUFS3O75489 264 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 F9P00740 461 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 GH2P01242 217 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 UMPSP11172 480 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 PTPN3P26045 913 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 PAFAH1B1P43034 410 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 RARSP54136 660 aaKnown RBP0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 GALCP54803 685 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 OLR1P78380 273 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 TFAP4Q01664 338 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 MELKQ14680 651 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 CCNG2Q16589 344 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 BAK1Q16611 211 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 ZNF776Q68DI1 518 aaPredicted RBP0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 CFAP206Q8IYR0 622 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 AFAP1Q8N556 730 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 SLC37A3Q8NCC5 494 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 RNF138Q8WVD3 245 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 DACH2Q96NX9 599 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 WDFY2Q96P53 400 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 GAD1Q99259 594 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 RAD9AQ99638 391 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 LPAR4Q99677 370 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 BTBD10Q9BSF8 475 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 NYXQ9GZU5 481 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 NTN4Q9HB63 628 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 FAM207AQ9NSI2 230 aaPredicted RBP0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 B3GAT1Q9P2W7 334 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 KLK12Q9UKR0 248 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 STUB1Q9UNE7 303 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 NAALADL1Q9UQQ1 740 aa0.74□□□□□ -2.29
RNU6-239P-201ENST00000390990 ARHGEF33A8MVX0 844 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 GJB3O75712 270 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 PRKAR1AP10644 381 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 HSPA8P11142 646 aaKnown RBP0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 HNRNPA2B1P22626 353 aaKnown RBP0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 GIFP27352 417 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 EPHA8P29322 1005 aaPredicted RBP0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 PTGER4P35408 488 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 PBX3P40426 434 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 GRK6P43250 576 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 OR3A2P47893 321 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 ACY1Q03154 408 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 EBI3Q14213 229 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 PTPN14Q15678 1187 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 LTB4RQ15722 352 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 PDCD2Q16342 344 aaPredicted RBP0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 C9orf129Q5T035 196 aaKnown RBP0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 TMEM116Q8NCL8 245 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 LINC01006Q8NI28 216 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 NFKBIDQ8NI38 313 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 SMARCE1Q969G3 411 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 FAM149B1Q96BN6 582 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 RNF125Q96EQ8 232 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 UBXN10Q96LJ8 280 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 OR6C1Q96RD1 312 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 RANBP9Q96S59 729 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 MAPKAP1Q9BPZ7 522 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 RBM24Q9BX46 236 aaKnown RBP0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 DEFB126Q9BYW3 111 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 LRRCC1Q9C099 1032 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 ZNF275Q9NSD4 429 aaPredicted RBP0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 SETD4Q9NVD3 440 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 SPHK1Q9NYA1 384 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 CLEC4EQ9ULY5 219 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 TBX20Q9UMR3 447 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 PCDHGB3Q9Y5G1 929 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 PCDHGA5Q9Y5G8 931 aa0.73□□□□□ -2.29
RNU6-239P-201ENST00000390990 PTCH1Q13635 1447 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 PCDH11YQ9BZA8 1340 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 HEPACAM2A8MVW5 462 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 PDHXO00330 501 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 VILLO15195 856 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 TXNL1O43396 289 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 PRC1O43663 620 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 ECE2O60344 883 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 SEC14L2O76054 403 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 MT-ND1P03886 318 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 QDPRP09417 244 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 VDRP11473 427 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 FASP25445 335 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 CSTF2P33240 577 aaKnown RBP eCLIP0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 HARS2P49590 506 aaKnown RBP0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 CCR3P51677 355 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 NDST2P52849 883 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 TPD52P55327 224 aaPredicted RBP0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 KRTAP12-3P60328 96 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 ZNF415Q09FC8 603 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 ITPK1Q13572 414 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 ODF4Q2M2E3 257 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 TFDP3Q5H9I0 405 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 SLC35D3Q5M8T2 416 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 RARS2Q5T160 578 aaKnown RBP0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 CYP20A1Q6UW02 462 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 CLEC17AQ6ZS10 378 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 CEP57L1Q8IYX8 460 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 SPICE1Q8N0Z3 855 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 PCYOX1LQ8NBM8 494 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 KIAA1524Q8TCG1 905 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms