RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 CES4AQ5XG92 561 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 LYSMD4Q5XG99 296 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 G2E3Q7L622 706 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 MAATS1Q7Z4T9 603 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 ARHGAP22Q7Z5H3 698 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 NUDT13Q86X67 352 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 LINC00346Q8IVM7 164 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 SLC39A11Q8N1S5 342 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 NUP37Q8NFH4 326 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 ATP8B4Q8TF62 1192 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 CHPT1Q8WUD6 406 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 LPGAT1Q92604 370 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 AGAP4Q96P64 663 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 CCDC3Q9BQI4 270 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 MIS12Q9H081 205 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 MMP27Q9H306 513 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 SYNCQ9H7C4 482 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 EQTNQ9NQ60 294 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 NDE1Q9NXR1 346 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 PSD3Q9NYI0 1048 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 GPR75-ASB3A0A0A6YYF3 556 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 ACOD1A6NK06 481 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 SHISA7A6NL88 538 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 MEIS2O14770 477 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 TSPAN1O60635 241 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 ITIH1P19827 911 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 GCH1P30793 250 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 CSTF2P33240 577 aaKnown RBP eCLIP2.67□□□□□ -1.98
TRAV40-201ENST00000390467 PCLAFQ15004 111 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 KRTAP13-3Q3SY46 172 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 PLEKHS1Q5SXH7 462 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 LEKR1Q6ZMV7 388 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 FRRS1Q6ZNA5 592 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 GDPGP1Q6ZNW5 385 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 ZNF584Q8IVC4 421 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 C11orf53Q8IXP5 236 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 C17orf53Q8N3J3 647 aaPredicted RBP2.67□□□□□ -1.98
TRAV40-201ENST00000390467 GUF1Q8N442 669 aaKnown RBP2.67□□□□□ -1.98
TRAV40-201ENST00000390467 POC5Q8NA72 575 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 ARSGQ96EG1 525 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 ATXN7L3BQ96GX2 97 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 GAL3ST4Q96RP7 486 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 ZNF577Q9BSK1 485 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 OSGEPL1Q9H4B0 414 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 SLC35C2Q9NQQ7 365 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.67□□□□□ -1.98
TRAV40-201ENST00000390467 ZNF510Q9Y2H8 683 aa2.67□□□□□ -1.98
TRAV40-201ENST00000390467 ZNF646O15015 1829 aaPredicted RBP2.66□□□□□ -1.98
TRAV40-201ENST00000390467 PRRC2AP48634 2157 aaKnown RBP2.66□□□□□ -1.98
TRAV40-201ENST00000390467 IGLV3-10A0A075B6K4 115 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 SNURFLB1AK76 121 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 HPRP00739 348 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 DANCRP0C864 163 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 FOLR2P14207 255 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 BCL3P20749 454 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 IL4RP24394 825 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 HLA-FP30511 346 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 ETV5P41161 510 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 TSFMP43897 325 aaKnown RBP2.66□□□□□ -1.98
TRAV40-201ENST00000390467 KRTAP10-8P60410 259 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 CD300CQ08708 224 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 NUP54Q7Z3B4 507 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 SLC37A3Q8NCC5 494 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 EXD1Q8NHP7 514 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 LRRC15Q8TF66 581 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 SYN2Q92777 582 aaPredicted RBP2.66□□□□□ -1.98
TRAV40-201ENST00000390467 CNRIP1Q96F85 164 aaPredicted RBP2.66□□□□□ -1.98
TRAV40-201ENST00000390467 SLC45A3Q96JT2 553 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 C4orf45Q96LM5 186 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 SPAG5Q96R06 1193 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 OVOL2Q9BRP0 275 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 RPP25Q9BUL9 199 aaKnown RBP2.66□□□□□ -1.98
TRAV40-201ENST00000390467 TDRD1Q9BXT4 1180 aaKnown RBP2.66□□□□□ -1.98
TRAV40-201ENST00000390467 PUS3Q9BZE2 481 aaKnown RBP2.66□□□□□ -1.98
TRAV40-201ENST00000390467 TLE6Q9H808 572 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 DPP3Q9NY33 737 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 FBXO2Q9UK22 296 aaPredicted RBP2.66□□□□□ -1.98
TRAV40-201ENST00000390467 PADI2Q9Y2J8 665 aa2.66□□□□□ -1.98
TRAV40-201ENST00000390467 A0A087WUV0 522 aaPredicted RBP2.65□□□□□ -1.99
TRAV40-201ENST00000390467 ASB14A6NK59 587 aa2.65□□□□□ -1.99
TRAV40-201ENST00000390467 G3V2L1 256 aa2.65□□□□□ -1.99
TRAV40-201ENST00000390467 ENTPD3O75355 529 aa2.65□□□□□ -1.99
TRAV40-201ENST00000390467 CD27P26842 260 aa2.65□□□□□ -1.99
TRAV40-201ENST00000390467 HOXD13P35453 343 aa2.65□□□□□ -1.99
TRAV40-201ENST00000390467 RXRGP48443 463 aa2.65□□□□□ -1.99
TRAV40-201ENST00000390467 ZFP36L1Q07352 338 aaKnown RBP2.65□□□□□ -1.99
TRAV40-201ENST00000390467 CDH18Q13634 790 aa2.65□□□□□ -1.99
TRAV40-201ENST00000390467 C11orf63Q6NUN7 778 aa2.65□□□□□ -1.99
TRAV40-201ENST00000390467 ABHD12Q8N2K0 398 aa2.65□□□□□ -1.99
TRAV40-201ENST00000390467 KLHDC1Q8N7A1 406 aa2.65□□□□□ -1.99
TRAV40-201ENST00000390467 THAP8Q8NA92 274 aa2.65□□□□□ -1.99
TRAV40-201ENST00000390467 OR10Q1Q8NGQ4 319 aa2.65□□□□□ -1.99
TRAV40-201ENST00000390467 ZNF622Q969S3 477 aaKnown RBP eCLIP2.65□□□□□ -1.99
TRAV40-201ENST00000390467 PDLIM5Q96HC4 596 aaKnown RBP2.65□□□□□ -1.99
TRAV40-201ENST00000390467 NKX3-1Q99801 234 aaPredicted RBP2.65□□□□□ -1.99
TRAV40-201ENST00000390467 WNT5BQ9H1J7 359 aa2.65□□□□□ -1.99
TRAV40-201ENST00000390467 OPA3Q9H6K4 179 aa2.65□□□□□ -1.99
TRAV40-201ENST00000390467 MYNNQ9NPC7 610 aa2.65□□□□□ -1.99
TRAV40-201ENST00000390467 GPR83Q9NYM4 423 aa2.65□□□□□ -1.99
TRAV40-201ENST00000390467 C19orf25Q9UFG5 118 aaPredicted RBP2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms