RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 COPS8Q99627 209 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 NLNQ9BYT8 704 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 ZBTB20Q9HC78 741 aaPredicted RBP13.92□□□□□ -0.18
RTF1-201ENST00000389629 PCDHB1Q9Y5F3 818 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 CLCA3PQ9Y6N3 262 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 TNRC6CQ9HCJ0 1690 aaKnown RBP13.92□□□□□ -0.18
RTF1-201ENST00000389629 UPK1BO75841 260 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 PAPSS2O95340 614 aaPredicted RBP13.92□□□□□ -0.18
RTF1-201ENST00000389629 GLUD1P00367 558 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 ALDOCP09972 364 aaKnown RBP13.92□□□□□ -0.18
RTF1-201ENST00000389629 ENGP17813 658 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 GADD45AP24522 165 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 HOXA11P31270 313 aaPredicted RBP13.92□□□□□ -0.18
RTF1-201ENST00000389629 RPP38P78345 283 aaKnown RBP13.92□□□□□ -0.18
RTF1-201ENST00000389629 ABRQ12979 859 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 ACOX1Q15067 660 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 SPATS1Q496A3 300 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 IL12RB2Q99665 862 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 SLAMF8Q9P0V8 285 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 SLC30A4O14863 429 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 TPST2O60704 377 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 EEDO75530 441 aaKnown RBP13.92□□□□□ -0.18
RTF1-201ENST00000389629 CDRT1O95170 752 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 ST3GAL4Q11206 333 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 TAF1AQ15573 450 aaPredicted RBP13.92□□□□□ -0.18
RTF1-201ENST00000389629 TRIM40Q6P9F5 258 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 ANKS3Q6ZW76 656 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 SERPINA9Q86WD7 417 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 GOLM1Q8NBJ4 401 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 OR13F1Q8NGS4 319 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 PYCR2Q96C36 320 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 WDR6Q9NNW5 1121 aaKnown RBP13.92□□□□□ -0.18
RTF1-201ENST00000389629 IL37Q9NZH6 218 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 PCDHGB3Q9Y5G1 929 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 SPIN1Q9Y657 262 aaPredicted RBP13.92□□□□□ -0.18
RTF1-201ENST00000389629 DNAJB5O75953 348 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 CD72P21854 359 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 MYL9P24844 172 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 PTGER3P43115 390 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 RPIAP49247 311 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 HNRNPFP52597 415 aaKnown RBP13.92□□□□□ -0.18
RTF1-201ENST00000389629 EMX1Q04741 257 aaPredicted RBP13.92□□□□□ -0.18
RTF1-201ENST00000389629 CXorf57Q6NSI4 855 aaKnown RBP13.92□□□□□ -0.18
RTF1-201ENST00000389629 ZBTB2Q8N680 514 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 HSH2DQ96JZ2 352 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 CEP295NLQ96MC4 621 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 SDR39U1Q9NRG7 319 aaPredicted RBP13.92□□□□□ -0.18
RTF1-201ENST00000389629 MCUBQ9NWR8 336 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 HAPLN1P10915 354 aaPredicted RBP13.91□□□□□ -0.18
RTF1-201ENST00000389629 POLR2IP36954 125 aaKnown RBP13.91□□□□□ -0.18
RTF1-201ENST00000389629 ATN1P54259 1190 aaPredicted RBP13.91□□□□□ -0.18
RTF1-201ENST00000389629 CACNG1Q06432 222 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 ALFQ53S48 1182 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 GOLGA7Q7Z5G4 137 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 DDX53Q86TM3 631 aaKnown RBP13.91□□□□□ -0.18
RTF1-201ENST00000389629 COL21A1Q96P44 957 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 CXCL16Q9H2A7 254 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 ZFYVE1Q9HBF4 777 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 TVP23BQ9NYZ1 205 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 ADAMTS5Q9UNA0 930 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 BOLA1Q9Y3E2 137 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 ZBTB42B2RXF5 422 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 ADAM23O75077 832 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 STSP08842 583 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 PRSS56P0CW18 603 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 BMP4P12644 408 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 RPS3P23396 243 aaKnown RBP eCLIP13.91□□□□□ -0.18
RTF1-201ENST00000389629 EMX2Q04743 252 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 CDK5R2Q13319 367 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 SMYD5Q6GMV2 418 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 RANBP10Q6VN20 620 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 KRTCAP2Q8N6L1 136 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 IMP4Q96G21 291 aaKnown RBP13.91□□□□□ -0.18
RTF1-201ENST00000389629 NSUN3Q9H649 340 aaKnown RBP13.91□□□□□ -0.18
RTF1-201ENST00000389629 CORO2BQ9UQ03 480 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 ZFP37Q9Y6Q3 630 aaPredicted RBP13.91□□□□□ -0.18
RTF1-201ENST00000389629 TMEM221A6NGB7 291 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 TBL1XO60907 577 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 AKR1A1P14550 325 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 STX4Q12846 297 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 HECTD3Q5T447 861 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 SPNS2Q8IVW8 549 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 TIGD4Q8IY51 512 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 GHDCQ8N2G8 530 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 LILRB4Q8NHJ6 448 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 C8orf48Q96LL4 319 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 UROC1Q96N76 676 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 ZNF599Q96NL3 588 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 ACAT2Q9BWD1 397 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 ATP13A3Q9H7F0 1226 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 ANKHQ9HCJ1 492 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 HPRP00739 348 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 NOS3P29474 1203 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 DUSP4Q13115 394 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 E2F2Q14209 437 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 L3HYPDHQ96EM0 354 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 MTERF1Q99551 399 aaKnown RBP13.91□□□□□ -0.18
RTF1-201ENST00000389629 C16orf70Q9BSU1 422 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 C1QTNF1Q9BXJ1 281 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 ASPNQ9BXN1 380 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms