RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 C1QTNF1Q9BXJ1 281 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 TNKS2Q9H2K2 1166 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 TM9SF3Q9HD45 589 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 TVP23BQ9NYZ1 205 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 GTF2IRD1Q9UHL9 959 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 SPEF1Q9Y4P9 236 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 DNAJB5O75953 348 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 YES1P07947 543 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 FDXRP22570 491 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 NOS3P29474 1203 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 BUD31P41223 144 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 FAM189BP81408 668 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 C2orf80Q0P641 193 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 ST3GAL4Q11206 333 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 ELAVL2Q12926 359 aaKnown RBP12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 ACOX1Q15067 660 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 UBE2UQ5VVX9 321 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 C11orf88Q6PI97 169 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 RGL4Q8IZJ4 473 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 CXCL16Q9H2A7 254 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 CTPS2Q9NRF8 586 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 PAQR5Q9NXK6 330 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 MANBAO00462 879 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 DYRK3O43781 588 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 KCNQ1P51787 676 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 CYP27C1Q4G0S4 372 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 RFTN2Q52LD8 501 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 COQ5Q5HYK3 327 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.82□□□□□ -0.362e-7■■■■■ 35.5
TRAPPC9-201ENST00000389328 FUNDC1Q8IVP5 155 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 TCAIMQ8N3R3 496 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 ZNF675Q8TD23 568 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 COL21A1Q96P44 957 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 SLC22A4Q9H015 551 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 KCNH4Q9UQ05 1017 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 COL18A1P39060 1754 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 A0A0D9SEW6 157 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 OR2AG2A6NM03 316 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 EDNRBP24530 442 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 PKDCCQ504Y2 493 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 LYPLAL1Q5VWZ2 237 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 TUBA3EQ6PEY2 450 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 C2orf73Q8N5S3 287 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 CHDHQ8NE62 594 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 VAPAQ9P0L0 249 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 CD84Q9UIB8 345 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 SLC28A2O43868 658 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 OR1E2P47887 323 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 ERVPABLB-1P60509 514 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 GABARAPL2P60520 117 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 ZNF45Q02386 682 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 EMX1Q04741 257 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 VN1R5Q7Z5H4 357 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 VTCN1Q7Z7D3 282 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 DPP10Q8N608 796 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 FAM110BQ8TC76 370 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 SLC38A2Q96QD8 506 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 CORO1BQ9BR76 489 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 YIPF2Q9BWQ6 316 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 TBC1D17Q9HA65 648 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 HSFX1Q9UBD0 423 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 MARF1Q9Y4F3 1742 aaKnown RBP12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 ISPDA4D126 451 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 SLC30A4O14863 429 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 FGF4P08620 206 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 STSP08842 583 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 HTR1BP28222 390 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 SDC2P34741 201 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 MANFP55145 182 aaKnown RBP12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 GRIK2Q13002 908 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 RCAN2Q14206 197 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 HKDC1Q2TB90 917 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 DCST1Q5T197 706 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 SMYD5Q6GMV2 418 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 DSG4Q86SJ6 1040 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 OR13F1Q8NGS4 319 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 XAGE5Q8WWM1 108 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 FUBP1Q96AE4 644 aaKnown RBP12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 OSGEPL1Q9H4B0 414 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 SEMA3GQ9NS98 782 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 UCKL1Q9NWZ5 548 aa12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 SPIN1Q9Y657 262 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC9-201ENST00000389328 A0A1B0GW55 424 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 ANKRD66B4E2M5 251 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 AQP9O43315 295 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 DUX4L2P0CJ85 424 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 DUX4L3P0CJ86 424 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 DUX4L4P0CJ87 422 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 DUX4L5P0CJ88 424 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 DUX4L6P0CJ89 424 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 DUX4L7P0CJ90 424 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 PRPS1L1P21108 318 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 SPAM1P38567 509 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 SDE2Q6IQ49 451 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 ZNF598Q86UK7 904 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 ASZ1Q8WWH4 475 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 RPL3LQ92901 407 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 TEFMQ96QE5 360 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 C16orf70Q9BSU1 422 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 TPT1P8Q9HAU6 139 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms