RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 EDDM13A0A1B0GTR0 161 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 LINC01553A4QN01 128 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 CLGNO14967 610 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 TPST1O60507 370 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 NFATC1O95644 943 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 SDC1P18827 310 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 PEX19P40855 299 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 ALDH3B2P48448 385 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 NTHL1P78549 312 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 LRRC74AQ0VAA2 488 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 NADK2Q4G0N4 442 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 ZNF658BQ4V348 819 aaPredicted RBP12.96□□□□□ -0.33
LCMT1-201ENST00000380962 LRRC73Q5JTD7 316 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 PARS2Q7L3T8 475 aaKnown RBP12.96□□□□□ -0.33
LCMT1-201ENST00000380962 THOC6Q86W42 341 aaKnown RBP12.96□□□□□ -0.33
LCMT1-201ENST00000380962 EID3Q8N140 333 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 PGBD3Q8N328 593 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 SVOPLQ8N434 492 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 KRTCAP2Q8N6L1 136 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 NAT16Q8N8M0 369 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 RASGEF1AQ8N9B8 481 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 WDR20Q8TBZ3 569 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 FAM110BQ8TC76 370 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 ADAMTS16Q8TE57 1224 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 NELL1Q92832 810 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 REXO5Q96IC2 774 aaKnown RBP12.96□□□□□ -0.33
LCMT1-201ENST00000380962 RNF145Q96MT1 663 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 SAMD11Q96NU1 681 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 THUMPD3Q9BV44 507 aaKnown RBP12.96□□□□□ -0.33
LCMT1-201ENST00000380962 TRIM4Q9C037 500 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 SERHLQ9NQF3 203 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 FAM120CQ9NX05 1096 aaKnown RBP12.96□□□□□ -0.33
LCMT1-201ENST00000380962 OBP2AQ9NY56 170 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 DNAJB9Q9UBS3 223 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 PCDHGB4Q9UN71 923 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 INVSQ9Y283 1065 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 PCDHGB5Q9Y5G0 923 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 PCDHGA11Q9Y5H2 935 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 GMEB1Q9Y692 573 aa12.96□□□□□ -0.33
LCMT1-201ENST00000380962 ZFC3H1O60293 1989 aaKnown RBP12.95□□□□□ -0.34
LCMT1-201ENST00000380962 A0A087WXM4 84 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 FAM149AA5PLN7 773 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 CXCR6O00574 342 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 EI24O14681 340 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 AREL1O15033 823 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 TSPAN6O43657 245 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 PRAMEF4O60810 478 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 RECQL5O94762 991 aaPredicted RBP12.95□□□□□ -0.34
LCMT1-201ENST00000380962 MYO1DO94832 1006 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 PTPN6P29350 595 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 ASMTP46597 345 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 GZMMP51124 257 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 ALDH3A2P51648 485 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 DPTQ07507 201 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 TMEM115Q12893 351 aaPredicted RBP12.95□□□□□ -0.34
LCMT1-201ENST00000380962 DYNC1I2Q13409 638 aaKnown RBP12.95□□□□□ -0.34
LCMT1-201ENST00000380962 ACOX1Q15067 660 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.95□□□□□ -0.34
LCMT1-201ENST00000380962 PRAMEF9Q5VWM5 478 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 NOXRED1Q6NXP6 359 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 AGTRAPQ6RW13 159 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 USP51Q70EK9 711 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 PATL1Q86TB9 770 aaKnown RBP12.95□□□□□ -0.34
LCMT1-201ENST00000380962 GPR180Q86V85 440 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 FAM47BQ8NA70 645 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 OR10A6Q8NH74 314 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 SORCS1Q8WY21 1168 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 OR8D1Q8WZ84 308 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 BADQ92934 168 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 REPS1Q96D71 796 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 PPP1R16AQ96I34 528 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 LINC00615Q96LM1 132 aaPredicted RBP12.95□□□□□ -0.34
LCMT1-201ENST00000380962 TMEM106CQ9BVX2 250 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 SPATA9Q9BWV2 254 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 PIDD1Q9HB75 910 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 DCAF13Q9NV06 445 aaKnown RBP12.95□□□□□ -0.34
LCMT1-201ENST00000380962 SIRT5Q9NXA8 310 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 STOX2Q9P2F5 926 aaPredicted RBP12.95□□□□□ -0.34
LCMT1-201ENST00000380962 VPS29Q9UBQ0 182 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 ADGRE2Q9UHX3 823 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 PCDHB14Q9Y5E9 798 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 DOCK6Q96HP0 2047 aa12.95□□□□□ -0.34
LCMT1-201ENST00000380962 C17orf113A0A1B0GUU1 675 aa12.94□□□□□ -0.34
LCMT1-201ENST00000380962 PDLIM1O00151 329 aa12.94□□□□□ -0.34
LCMT1-201ENST00000380962 UPK1AO00322 258 aa12.94□□□□□ -0.34
LCMT1-201ENST00000380962 MTX2O75431 263 aa12.94□□□□□ -0.34
LCMT1-201ENST00000380962 KIR3DL1P43629 444 aa12.94□□□□□ -0.34
LCMT1-201ENST00000380962 BIRC2Q13490 618 aa12.94□□□□□ -0.34
LCMT1-201ENST00000380962 CAMK1Q14012 370 aa12.94□□□□□ -0.34
LCMT1-201ENST00000380962 DAG1Q14118 895 aa12.94□□□□□ -0.34
LCMT1-201ENST00000380962 HNRNPA1L2Q32P51 320 aaKnown RBP12.94□□□□□ -0.34
LCMT1-201ENST00000380962 PLA2G4EQ3MJ16 856 aa12.94□□□□□ -0.34
LCMT1-201ENST00000380962 CWF19L1Q69YN2 538 aaKnown RBP12.94□□□□□ -0.34
LCMT1-201ENST00000380962 ERICH5Q6P6B1 374 aa12.94□□□□□ -0.34
LCMT1-201ENST00000380962 ABRAXAS1Q6UWZ7 409 aa12.94□□□□□ -0.34
LCMT1-201ENST00000380962 CAMKMTQ7Z624 323 aa12.94□□□□□ -0.34
LCMT1-201ENST00000380962 SERPINA11Q86U17 422 aa12.94□□□□□ -0.34
LCMT1-201ENST00000380962 METTL25Q8N6Q8 603 aa12.94□□□□□ -0.34
LCMT1-201ENST00000380962 OR8J2Q8NGG1 315 aa12.94□□□□□ -0.34
LCMT1-201ENST00000380962 PNPT1Q8TCS8 783 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms